Evidence map›Paper›PMID 12455995›Full record

ArticleEukaryotic cell2002

GTPase-activating proteins for Cdc42.

Gregory R Smith, Scott A Givan, Paul Cullen, George F Sprague

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 134 citations in OpenAlex.

  1. Article
  2. Article
  3. CDC42 Regulatory Patterns Related To Inflammatory Bowel Disease and Hyperglycemia.Journal of bioinformatics and systems biology : Open access · 2025
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Crystal Structure of the Epo1-Bem3 Complex for Bud Growth.International journal of molecular sciences · 2021
    Article
  9. Lipid flippases in polarized growth.Current genetics · 2021
    Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Gregory R SmithInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403-1229, USA.
Scott A Givan
Paul Cullen
George F Sprague
University of Oregon · US

Funding

Graduate Training in Genetics Administrative Supplement - Career Curriculum DevelopmentT32GM007413 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 1985 to 2022
$7.8M
DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007348 · NICHD · UNIVERSITY OF OREGON · PI Chris Q Doe, KRYN STANKUNAS · 1989 to 2026
$6.8M
GENETIC REGULATION OF YEAST CELL TYPER01GM030027 · NIGMS · UNIVERSITY OF OREGON · PI SPRAGUE, GEORGE F. · 1985 to 2008
$3.0M
GENETIC ANALYSIS OF P120 CATENIN IN DROSPHILAF32GM019888 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI MYSTER, STEVEN H · 1999 to 2001
$80k
NICHD NIH HHS HD-07348NICHD NIH HHS T32 HD007348NIGMS NIH HHS F32 GM019888NIGMS NIH HHS GM-07413NIGMS NIH HHS GM-19888NIGMS NIH HHS GM-30027NIGMS NIH HHS R01 GM030027NIGMS NIH HHS T32 GM007413
6 · The paper itself

Abstract

The Rho-type GTPase, Cdc42, has been implicated in a variety of functions in the yeast life cycle, including septin organization for cytokinesis, pheromone response, and haploid invasive growth. A group of proteins called GTPase-activating proteins (GAPs) catalyze the hydrolysis of GTP to GDP, thereby inactivating Cdc42. At the time this study began, there was one known GAP, Bem3, and one putative GAP, Rga1, for Cdc42. We identified another putative GAP for Cdc42 and named it Rga2 (Rho GTPase-activating protein 2). We confirmed by genetic and biochemical criteria that Rga1, Rga2, and Bem3 act as GAPs for Cdc42. A detailed characterization of Rga1, Rga2, and Bem3 suggested that they regulate different subsets of Cdc42 function. In particular, deletion of the individual GAPs conferred different phenotypes. For example, deletion of RGA1, but not RGA2 or BEM3, caused hyperinvasive growth. Furthermore, overproduction or loss of Rga1 and Rga2, but not Bem3, affected the two-hybrid interaction of Cdc42 with Ste20, a p21-activated kinase (PAK) kinase required for haploid invasive growth. These results suggest Rga1, and possibly Rga2, facilitate the interaction of Cdc42 with Ste20 to mediate signaling in the haploid invasive growth pathway. Deletion of BEM3 resulted in cells with severe morphological defects not observed in rga1delta or rga2delta strains. These data suggest that Bem3 and, to a lesser extent, Rga1 and Rga2 facilitate the role of Cdc42 in septin organization. Thus, it appears that the GAPs play a role in modulating specific aspects of Cdc42 function. Alternatively, the different phenotypes could reflect quantitative rather than qualitative differences in GAP activity in the mutant strains.

Indexed as

Amino Acid Sequencecdc42 GTP-Binding Protein, Saccharomyces cerevisiaeGene DeletionGenes, FungalGenes, ReporterGTPase-Activating ProteinsHaploidyLac OperonMolecular Sequence DataMutationPhenotypeSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence Homology, Amino AcidSignal TransductionBEM3 protein, S cerevisiaecdc42 GTP-Binding Protein, Saccharomyces cerevisiaeGTPase-Activating ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID12455995
PMCPMC118018
OpenAlexW2105912776

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.