Evidence map›Paper›PMID 12455969›Full record

ArticleEukaryotic cell2002

Neurospora clock-controlled gene 9 (ccg-9) encodes trehalose synthase: circadian regulation of stress responses and development.

Mari L Shinohara, Alejandro Correa, Deborah Bell-Pedersen, Jay C Dunlap, Jennifer J Loros

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 60 citations in OpenAlex.

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  11. Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.Proceedings of the National Academy of Sciences of the United States of America · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mari L ShinoharaDepartment of Genetics, Dartmouth Medical School, Hanover, New Hampshire 03755, USA.
Alejandro Correa
Deborah Bell-Pedersen
Jay C Dunlap
Jennifer J Loros
Dartmouth College · USTexas A&M University · US

Funding

The Circadian Clock in the Context of the Cyanobacterial CellP01NS039546 · NINDS · TEXAS A&M UNIVERSITY SYSTEM · PI BELL-PEDERSEN, DEBORAH · 2000 to 2010
$10.6M
GENETIC AND MOLECULAR DISSECTION OF THE NEUROSPORA CLOCKR01GM034985 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C. · 1986 to 2015
$5.7M
IDENTIFICATION AND ANALYSIS OF CLOCK-CONTROLLED GENESR01MH044651 · NIMH · DARTMOUTH COLLEGE · PI LOROS, JENNIFER J. · 1989 to 2007
$4.7M
Molecular Genetic Analysis of Fungal Circadian RythmsR01GM058529 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI BELL-PEDERSEN, DEBORAH · 1999 to 2017
$4.6M
ISOLATION AND ANALYSIS OF CLOCK-CONTROLLED GENESF32GM015185 · NIGMS · DARTMOUTH COLLEGE · PI BELL-PEDERSEN, DEBORAH · 1992 to 1994
–
NIGMS NIH HHS GM15185NIGMS NIH HHS GM58529NIGMS NIH HHS R01 GM034985NIGMS NIH HHS R01 GM058529NIMH NIH HHS MH44651NIMH NIH HHS R01 MH044651NINDS NIH HHS NS39546NINDS NIH HHS P01 NS039546
6 · The paper itself

Abstract

The circadian clock of Neurospora crassa regulates the rhythmic expression of a number of genes encoding diverse functions which, as an ensemble, are adaptive to life in a rhythmic environment of alternating levels of light and dark, warmth and coolness, and dryness and humidity. Previous differential screens have identified a number of such genes based solely on their cycling expression, including clock-controlled gene 9 (ccg-9). Sequence analysis now shows the predicted CCG-9 polypeptide to be homologous to a novel form of trehalose synthase; as such it would catalyze the synthesis of the disaccharide trehalose, which plays an important role in protecting many cells from environmental stresses. Consistent with this, heat, glucose starvation, and osmotic stress induce ccg-9 transcript accumulation. Surprisingly, however, a parallel role in development is suggested by the finding that inactivation of ccg-9 results in altered conidiophore morphology and abolishes the normal circadian rhythm of asexual macroconidial development. Examination of a clock component, FRQ, in the ccg-9-null strain revealed normal cycling, phosphorylation, and light induction, indicating that loss of the conidiation rhythm is not due to changes in either the circadian oscillator or light input into the clock but pointing instead to a defect in circadian output. These data imply an interplay between a role of trehalose in stress protection and an apparent requirement for trehalose in clock regulation of conidiation under constant environmental conditions. This requirement can be bypassed by a daily light signal which drives a light-entrained rhythm in conidiation in the ccg-9-null strain; this bypass suggests that the trehalose requirement is related to clock control of development and not to the developmental process itself. Circadian control of trehalose synthase suggests a link between clock control of stress responses and that of development.

Indexed as

Circadian RhythmGene Expression Regulation, FungalFungal ProteinsGlucosyltransferasesNeurospora crassaOxidative StressFungal ProteinsGlucosyltransferasestrehalose synthase

Identifiers

PMID12455969
PMCPMC118043
OpenAlexW2130090648

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.