Evidence map›Paper›PMID 12455693›Full record

ArticleEukaryotic cell2002

Copper-dependent iron assimilation pathway in the model photosynthetic eukaryote Chlamydomonas reinhardtii.

Sharon La Fontaine, Jeanette M Quinn, Stacie S Nakamoto, M Dudley Page, Vera Göhre, Jeffrey L Moseley, Janette Kropat, Sabeeha Merchant

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 195 citations in OpenAlex.

  1. Article
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  6. The Elements of Life, Photosynthesis and Genomics.Journal of molecular biology · 2025
    Review
  7. Article
  8. Article
  9. Review
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  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Single-cell visualization and quantification of trace metals inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Iron metabolism strategies in diatoms.Journal of experimental botany · 2021
    Review
  19. Fe-S Protein Synthesis in Green Algae Mitochondria.Plants (Basel, Switzerland) · 2021
    Review
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Sharon La FontaineDepartment of Chemistry and Biochemistry, University of California, Los Angeles 90095-1569, USA.
Jeanette M Quinn
Stacie S Nakamoto
M Dudley Page
Vera Göhre
Jeffrey L Moseley
Janette Kropat
Sabeeha Merchant
Deakin University · AUUniversity of California, Los Angeles · US

Funding

Nutritional Cu Signaling and HomeostasisR01GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SABEEHA MERCHANT · 1995 to 2026
$4.6M
Nutritional Copper Signaling and HomeostasisR37GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MERCHANT, SABEEHA · 2011 to 2020
$4.3M
CU-DEPENDENT TRANSCRIPTIONAL REGULATIONR29GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MERCHANT, SABEEHA · 1989 to 1993
–
NIGMS NIH HHS GM42143NIGMS NIH HHS R01 GM042143NIGMS NIH HHS R37 GM042143
6 · The paper itself

Abstract

The unicellular green alga Chlamydomonas reinhardtii is a valuable model for studying metal metabolism in a photosynthetic background. A search of the Chlamydomonas expressed sequence tag database led to the identification of several components that form a copper-dependent iron assimilation pathway related to the high-affinity iron uptake pathway defined originally for Saccharomyces cerevisiae. They include a multicopper ferroxidase (encoded by Fox1), an iron permease (encoded by Ftr1), a copper chaperone (encoded byAtx1), and a copper-transporting ATPase. A cDNA, Fer1, encoding ferritin for iron storage also was identified. Expression analysis demonstrated that Fox1 and Ftrl were coordinately induced by iron deficiency, as were Atx1 and Fer1, although to lesser extents. In addition, Fox1 abundance was regulated at the posttranscriptional level by copper availability. Each component exhibited sequence relationship with its yeast, mammalian, or plant counterparts to various degrees; Atx1 of C. reinhardtii is also functionally related with respect to copper chaperone and antioxidant activities. Fox1 is most highly related to the mammalian homologues hephaestin and ceruloplasmin; its occurrence and pattern of expression in Chlamydomonas indicate, for the first time, a role for copper in iron assimilation in a photosynthetic species. Nevertheless, growth of C. reinhardtii under copper- and iron-limiting conditions showed that, unlike the situation in yeast and mammals, where copper deficiency results in a secondary iron deficiency, copper-deficient Chlamydomonas cells do not exhibit symptoms of iron deficiency. We propose the existence of a copper-independent iron assimilation pathway in this organism.

Indexed as

Adenosine TriphosphatasesAlgal ProteinsAmino Acid SequenceAnimalsBase SequenceCeruloplasminChlamydomonas reinhardtiiCopperFerritinsGene Expression RegulationIronMembrane Transport ProteinsMolecular ChaperonesMolecular Sequence DataPhotosynthesisSequence Analysis, DNAAdenosine TriphosphatasesAlgal ProteinsCeruloplasminCopperFerritinsIronMembrane Transport ProteinsMolecular Chaperones

Identifiers

PMID12455693
PMCPMC126744
OpenAlexW2055172046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.