Evidence map›Paper›PMID 12454749›Full record

ArticleLeukemia2002

Expression profiling of B cell chronic lymphocytic leukemia suggests deficient CD1-mediated immunity, polarized cytokine response, altered adhesion and increased intracellular protein transport and processing of leukemic cells.

Z Zheng, S Venkatapathy, G Rao, C A Harrington

Abstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Human CD4Immunology · 2024
    Article
  5. The function of γδ T cells in humoral immune responses.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2023
    Review
  6. IdentifyingPeerJ · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Z ZhengDivision of Hematology, Stanford University School of Medicine, Stanford, CA, USA. zhizheng10@yahoo.com
S Venkatapathy
G Rao
C A Harrington
Affymax (United States) · USOregon Health & Science University · USStanford University · US

Funding

ACTIVATION OF BCL-2 IN HEMATOLOGIC MALIGNANCIESR01CA056764 · NCI · STANFORD UNIVERSITY · PI BOXER, LINDA M · 1993 to 2012
$3.3M
TECHNOLOGY DEVELOPMENTP01HG001323 · NHGRI · AFFYMETRIX, INC. · PI LIPSHUTZ, ROBERT · 1995 to 1997
–
NCI NIH HHS 5R01CA056764-08NHGRI NIH HHS P01HG01323
6 · The paper itself

Abstract

We used oligonucleotide microarrays to profile the expression of chronic lymphocytic leukemia (CLL) B cells from eight patients compared with CD5-expressing normal B cells from four donors and with pooled normal circulating B cells. Of 6790 genes examined, we identified 87 genes that were differentially expressed at least two-fold between CLL and the normal B cells. CLL cells significantly down-regulated transcripts from CD1c and CD1d genes, which encode proteins known to present lipid antigen and mediate innate and adaptive immunity. The expression pattern was also consistent with reduced signaling by interferon gamma but increased response to interleukin 4 in leukemic cells. CLL cells increased the expression of several collagen-associated extracellular matrix and adhesion molecules, up-regulated many genes involved in intracellular protein transport and processing, while downregulating genes involved in proliferation and metabolism. Based on the expression pattern, we propose that CLL-B cells prolong their survival through increased interaction with survival factors such as IL-4, and through various mechanisms of evading the immune response, such as turning off the expression of CD1c and CD1d, reducing immunogenic response to interferon gamma, inactivating T cell in B-T interaction and increasing the expression of immunoglobulin receptors which neutralize antibody-dependent cell-mediated cytotoxicity.

Indexed as

Gene Expression ProfilingAdultAgedAged, 80 and overAntigens, CD1Antigens, CD1dB-LymphocytesCase-Control StudiesCell AdhesionCytokinesExtracellular Matrix ProteinsFemaleGene Expression Regulation, NeoplasticGlycoproteinsHumansImmunityAntigens, CD1Antigens, CD1dCD1C protein, humanCD1D protein, humanCytokinesExtracellular Matrix ProteinsGlycoproteinsInterferon gamma ReceptorReceptors, ImmunologicReceptors, InterferonReceptors, Interleukin-4RNA, Messenger

Identifiers

PMID12454749
OpenAlexW1984947358

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.