Evidence map›Paper›PMID 12451123›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2002

Identification of genes that are downregulated in the absence of the POU domain transcription factor pou3f1 (Oct-6, Tst-1, SCIP) in sciatic nerve.

John R Bermingham, Susan Shumas, Tom Whisenhunt, Erich E Sirkowski, Shawn O'Connell, Steven S Scherer, Michael G Rosenfeld

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 44 citations in OpenAlex.

  1. Validation of a NovelFrontiers in cell and developmental biology · 2021
    Article
  2. Genome-scale study of transcription factor expression in the branching mouse lung.Developmental dynamics : an official publication of the American Association of Anatomists · 2012
    Article
  3. Article
  4. Review
  5. Article
  6. Intracellular amino acid sensing and mTORC1-regulated growth: new ways to block an old target?Current opinion in investigational drugs (London, England : 2000) · 2010
    Review
  7. Article
  8. Review
  9. Analysis of peripheral nerve expression profiles identifies a novel myelin glycoprotein, MP11.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2008
    Article
  10. Article
  11. Article
  12. Organization and expression of the SLC36 cluster of amino acid transporter genes.Mammalian genome : official journal of the International Mammalian Genome Society · 2004
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

John R BerminghamMcLaughlin Research Institute, Great Falls, Montana 59405, USA. jrbjr@po.mri.montana.edu
Susan Shumas
Tom Whisenhunt
Erich E Sirkowski
Shawn O'Connell
Steven S Scherer
Michael G Rosenfeld
University of Pennsylvania · USHoward Hughes Medical Institute · USMcLaughlin Research Institute · USUniversity of California, San Diego · US

Funding

Ligand Regulated Epigenetic/Nuclear Architectural Strategies and Human DiseaseR01NS034934 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ROSENFELD, MICHAEL G · 1995 to 2013
$6.8M
GENETIC CONTROL OF SCHWANN CELL MYELINATIONR01NS040751 · NINDS · MC LAUGHLIN RESEARCH INSTITUTE · PI BERMINGHAM, JOHN RUTLEDGE · 2001 to 2011
$3.4M
ROLES OF SCIP AND KROX-20 IN MYELINATIONR01NS037100 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI SCHERER, STEVEN S · 1998 to 2000
$190k
NINDS NIH HHS 5O1 NS 34934-11NINDS NIH HHS NS37100NINDS NIH HHS NS40751NINDS NIH HHS R01 NS034934NINDS NIH HHS R01 NS040751
6 · The paper itself

Abstract

Despite the importance of myelinating Schwann cells in health and disease, little is known about the genetic mechanisms underlying their development. The POU domain transcription factor pou3f1 (Tst-1, SCIP, Oct-6) is required for the normal differentiation of myelinating Schwann cells, but its precise role requires identification of the genes that it regulates. Here we report the isolation of six genes whose expression is reduced in the absence of pou3f1. Only one of these genes, the fatty acid transport protein P2, was known previously to be expressed in Schwann cells. The LIM domain proteins cysteine-rich protein-1 (CRP1) and CRP2 are expressed in sciatic nerve and induced by forskolin in cultured Schwann cells, but only CRP2 requires pou3f1 for normal expression. pou3f1 appears to require the claw paw gene product for activation of at least some of its downstream effector genes. Expression of the novel Schwann cell genes after nerve injury suggests that they are myelin related. One of the genes, tramdorin1, encodes a novel amino acid transport protein that is localized to paranodes and incisures. Our results suggest that pou3f1 functions to activate gene expression in the differentiation of myelinating Schwann cells.

Indexed as

Avian ProteinsGene Expression ProfilingAdaptor Proteins, Signal TransducingAmino Acid Transport SystemsAnimalsCarrier ProteinsCCAAT-Enhancer-Binding Protein-betaCell DifferentiationCell MembraneCells, CulturedColforsinCytoskeletonDisease Models, AnimalDown-RegulationLIM Domain ProteinsMiceAdaptor Proteins, Signal TransducingAmino Acid Transport SystemsAvian ProteinsCarrier ProteinsCCAAT-Enhancer-Binding Protein-betaColforsinLIM Domain ProteinsOctamer Transcription Factor-6Pou3f1 protein, mousePou3f1 protein, ratRNA, MessengerTranscription Factors

Identifiers

PMID12451123
PMCPMC6758772
OpenAlexW1556684753

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.