Evidence map›Paper›PMID 12446782›Full record

ArticleMolecular and cellular biology2002

hSnm1 colocalizes and physically associates with 53BP1 before and after DNA damage.

Christopher T Richie, Carolyn Peterson, Tao Lu, Walter N Hittelman, Phillip B Carpenter, Randy J Legerski

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Structure and Function of SNM1 Family Nucleases.Advances in experimental medicine and biology · 2023
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The multifunctional SNM1 gene family: not just nucleases.Future oncology (London, England) · 2010
    Review
  10. Article
  11. SNM1A acts downstream of ATM to promote the G1 cell cycle checkpoint.Biochemical and biophysical research communications · 2008
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. 53BP1 and p53 synergize to suppress genomic instability and lymphomagenesis.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Christopher T RichieDepartment of Molecular Genetics, M. D. Anderson Cancer Center, Houston, Texas 77030, USA.
Carolyn Peterson
Tao Lu
Walter N Hittelman
Phillip B Carpenter
Randy J Legerski
The University of Texas MD Anderson Cancer Center · USThe University of Texas Health Science Center at Houston · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
University of Texas SPORE in Prostate CancerP50CA090270 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LOGOTHETIS, CHRISTOPHER J. · 2001 to 2007
$13.6M
TRAINING PROGRAM IN MOLECULAR GENETICS OF CANCERT32CA009299 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LOZANO, GUILLERMINA · 1985 to 2014
$4.7M
ISOLATION AND ANALYSIS OF HUMAN DNA REPAIR GENESR01CA052461 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LEGERSKI, RANDY J · 1992 to 2006
$1.6M
MECHANISMS OF RECOMBINATIONAL DNA REPAIRR01CA075160 · NCI · UNIVERSITY OF TEXAS MD ANDERSON CAN CTR · PI LEGERSKI, RANDY J · 1998 to 2005
$1.4M
GENETIC DETERMINANTS OF MULTISTEP ORAL TUMORIGENESISR01DE013157 · NIDCR · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI HITTELMAN, WALTER N. · 1999 to 2006
$1.4M
Role of 53BP1 during the DNA damage responseR01GM065812 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CARPENTER, PHILLIP B · 2002 to 2006
$1.3M
Role of 53BP1 During the DNA Damage ResponseR56GM065812 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CARPENTER, PHILLIP B · 2007 to 2007
$273k
NCI NIH HHS CA09299NCI NIH HHS CA16672NCI NIH HHS CA52461NCI NIH HHS CA75160NCI NIH HHS CA90270NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA090270NCI NIH HHS R01 CA052461NCI NIH HHS R01 CA075160NCI NIH HHS T32 CA009299NIDCR NIH HHS R01 DE013157NIDCR NIH HHS R01 DE 13157NIGMS NIH HHS GM65812-01NIGMS NIH HHS R01 GM065812NIGMS NIH HHS R56 GM065812
6 · The paper itself

Abstract

snm1 mutants of Saccharomyces cerevisiae have been shown to be specifically sensitive to DNA interstrand crosslinking agents but not sensitive to monofunctional alkylating agents, UV, or ionizing radiation. Five homologs of SNM1 have been identified in the mammalian genome and are termed SNM1, SNM1B, Artemis, ELAC2, and CPSF73. To explore the functional role of human Snm1 in response to DNA damage, we characterized the cellular distribution and dynamics of human Snm1 before and after exposure to DNA-damaging agents. Human Snm1 was found to localize to the cell nucleus in three distinct patterns. A particular cell showed diffuse nuclear staining, multiple nuclear foci, or one or two larger bodies confined to the nucleus. Upon exposure to ionizing radiation or an interstrand crosslinking agent, the number of cells exhibiting Snm1 bodies was reduced, while the population of cells with foci increased dramatically. Indirect immunofluorescence studies also indicated that the human Snm1 protein colocalized with 53BP1 before and after exposure to ionizing radiation, and a physical interaction was confirmed by coimmunoprecipitation assays. Furthermore, human Snm1 foci formed after ionizing radiation were largely coincident with foci formed by human Mre11 and to a lesser extent with those formed by BRCA1, but not with those formed by human Rad51. Finally, we mapped a region of human Snm1 of approximately 220 amino acids that was sufficient for focus formation when attached to a nuclear localization signal. Our results indicate a novel function for human Snm1 in the cellular response to double-strand breaks formed by ionizing radiation.

Indexed as

Intracellular Signaling Peptides and ProteinsPhosphoproteinsBRCA1 ProteinCarrier ProteinsCell LineCell NucleusCross-Linking ReagentsDNADNA-Binding ProteinsDNA DamageDNA RepairEndodeoxyribonucleasesExodeoxyribonucleasesFlow CytometryGenes, ReporterHumansBRCA1 ProteinCarrier ProteinsCross-Linking ReagentsDNADNA-Binding ProteinsEndodeoxyribonucleasesExodeoxyribonucleasesIntracellular Signaling Peptides and ProteinsMRE11 protein, S cerevisiaeNuclear ProteinsPhosphoproteinsPSO2 protein, S cerevisiaeRAD51 protein, humanRad51 RecombinaseRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsTP53BP1 protein, humanTumor Suppressor p53-Binding Protein 1

Identifiers

PMID12446782
PMCPMC139863
OpenAlexW2151062921

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.