Evidence map›Paper›PMID 12439753›Full record

ArticleOncogene2002

Cloning of a novel phosphotyrosine binding domain containing molecule, Odin, involved in signaling by receptor tyrosine kinases.

Akhilesh Pandey, Blagoy Blagoev, Irina Kratchmarova, Minerva Fernandez, Mogens Nielsen, Troels Zakarias Kristiansen, Osamu Ohara, Alexandre V Podtelejnikov, Serge Roche, Harvey F Lodish and 1 more

Abstract read
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In one paragraph

Article in Oncogene, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Combinatorial proteomic analysis of intercellular signaling applied to the CD28 T-cell costimulatory receptor.Proceedings of the National Academy of Sciences of the United States of America · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Akhilesh PandeyWhitehead Institute for Biomedical Research, Cambridge, Massachusetts 02142, USA. Pandey@cebi.sdu.dk
Blagoy Blagoev
Irina Kratchmarova
Minerva Fernandez
Mogens Nielsen
Troels Zakarias Kristiansen
Osamu Ohara
Alexandre V Podtelejnikov
Serge Roche
Harvey F Lodish
Matthias Mann
University of Southern Denmark · DKWhitehead Institute for Biomedical Research · USCentre de Recherche en Biologie cellulaire de Montpellier · FRKazusa DNA Research Institute · JP

Funding

SIGNAL TRANSDUCTION THROUGH TH ERYTHROPOIETIN RECEPTORK01CA075447 · NCI · JOHNS HOPKINS UNIVERSITY · PI PANDEY, AKHILESH · 1997 to 2001
$319k
NCI NIH HHS K01 CA75447
6 · The paper itself

Abstract

We have used a proteomic approach using mass spectrometry to identify signaling molecules involved in receptor tyrosine kinase signaling pathways. Using affinity purification by anti-phosphotyrosine antibodies to enrich for tyrosine phosphorylated proteins, we have identified a novel signaling molecule in the epidermal growth factor receptor signaling pathway. This molecule, designated Odin, contains several ankyrin repeats, two sterile alpha motifs and a phosphotyrosine binding domain and is ubiquitously expressed. Using antibodies against endogenous Odin, we show that it undergoes tyrosine phosphorylation upon addition of growth factors such as EGF or PDGF but not by cytokines such as IL-3 or erythropoietin. Immunofluorescence experiments as well as Western blot analysis on subcellular fractions demonstrated that Odin is localized to the cytoplasm both before and after growth factor treatment. Deletion analysis showed that the phosphotyrosine binding domain of Odin is not required for its tyrosine phosphorylation. Overexpression of Odin, but not an unrelated adapter protein, Grb2, inhibited EGF-induced activation of c-Fos promoter. Microinjection of wild-type or a mutant version lacking the PTB domain into NIH3T3 fibroblasts inhibited PDGF-induced mitogenesis. Taken together, our results indicate that Odin may play a negative role in growth factor receptor signaling pathways.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid SequenceBinding SitesCloning, MolecularCytoplasmEpidermal Growth FactorMolecular Sequence DataPhosphorylationPhosphotyrosinePlatelet-Derived Growth FactorProto-Oncogene Proteins c-fosReceptor Protein-Tyrosine KinasesSignal TransductionAdaptor Proteins, Signal TransducingANKS1A protein, humanEpidermal Growth FactorPhosphotyrosinePlatelet-Derived Growth FactorProto-Oncogene Proteins c-fosReceptor Protein-Tyrosine Kinases

Identifiers

PMID12439753
OpenAlexW2036050290

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.