Evidence map›Paper›PMID 12438349›Full record

ArticleInfection and immunity2002

Cloning and porin activity of the major outer membrane protein P1 from Coxiella burnetii.

Sunita Varghees, Kati Kiss, Giovanni Frans, Orit Braha, James E Samuel

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Identification of Immunogenic Linear B-Cell Epitopes inPathogens (Basel, Switzerland) · 2021
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  6. Quantitative Proteome Profiling ofFrontiers in microbiology · 2019
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  9. Article
  10. Review
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sunita VargheesDepartment of Medical Microbiology and Immunology, Texas A&M University System Health Science Center, College Station 77843-1114, USA.
Kati Kiss
Giovanni Frans
Orit Braha
James E Samuel
Texas A&M University System · US

Funding

Pathogenic Roles of Coxiella burnetti ProteinsR01AI037744 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI SAMUEL, JAMES EVANS · 2003 to 2007
$1.8M
PATHOGENIC ROLES OF COXIELLA BURNETTI SURFACE PROTEINSR21AI037744 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI SAMUEL, JAMES E · 2000 to 2000
$313k
PATHOGENIC ROLES OF COXIELLA BURNETII SURFACE PROTEINSR29AI037744 · NIAID · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI SAMUEL, JAMES E · 1995 to 1999
–
NIAID NIH HHS AI37744NIAID NIH HHS AI448191NIAID NIH HHS R01 AI037744NIAID NIH HHS R21 AI037744NIAID NIH HHS R29 AI037744
6 · The paper itself

Abstract

Coxiella burnetii, the etiological agent of Q fever, is a gram-negative obligate intracellular bacterium. Two striking characteristics of this microorganism are its ability to thrive within a phagolysosome and its ability to persist in the environment outside a host cell. These abilities have been attributed to the existence of C. burnetii developmental cycle variants: large-cell variants (LCV), small-cell variants (SCV), and small dense cells (SDC). Variants differ in protein profiles, including differential expression of a major outer membrane protein (MOMP) of C. burnetii, designated P1. The approximately 29-kDa MOMP is highly expressed in LCV, down-regulated in SCV, and not apparent in SDC. We sought to characterize P1 through purification of native protein for N-terminal analysis, cloning, and functional studies. Highly purified P1, extracted from C. burnetii membranes by using the zwitterionic detergent Empigen, allowed the determination of N-terminal and internal peptide sequences. The entire P1 coding locus was cloned by PCR amplification based upon these peptide sequences, followed by inverse PCR. Comparison of the predicted P1 amino acid sequences among the C. burnetii isolates Nine Mile, Koka, Scurry, and Kerns indicated a high degree of conservation. Structural prediction suggests that the peptide has a predominantly beta-sheet conformation, consistent with bacterial porins. Typical porin characteristics were observed for native P1, including detergent solubilization properties, heat modification of purified protein, and channel formation in a planar lipid bilayer. Characterization of differentially expressed P1 as a porin increases our understanding of the function of morphological variants and their role in pathogenesis.

Indexed as

Amino Acid SequenceAntigens, BacterialBacterial Outer Membrane ProteinsCell MembraneCloning, MolecularCoxiella burnetiiGene Expression Regulation, BacterialLipid BilayersMembrane ProteinsPolymerase Chain ReactionPorinsSequence Analysis, DNAAntigens, BacterialBacterial Outer Membrane ProteinsLipid BilayersMembrane ProteinsP1 protein, Coxiella burnetiiPorins

Identifiers

PMID12438349
PMCPMC133000
OpenAlexW2118764420

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.