Evidence map›Paper›PMID 12417741›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Mbd4 inactivation increases Cright-arrowT transition mutations and promotes gastrointestinal tumor formation.

Edmund Wong, Kan Yang, Mari Kuraguchi, Uwe Werling, Elena Avdievich, Kunhua Fan, Melissa Fazzari, Bo Jin, Anthony M C Brown, Martin Lipkin and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 175 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Prognostic Significance ofPhenomics (Cham, Switzerland) · 2024
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  8. A naturally occurring variant ofGenome research · 2023
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Proteins That Read DNA Methylation.Advances in experimental medicine and biology · 2022
    Article
  14. Review
  15. Role of mismatch repair in aging.International journal of biological sciences · 2021
    Review
  16. Review
  17. Article
  18. Investigating Tumor Heterogeneity in Mouse Models.Annual review of cancer biology · 2020
    Article
  19. Article
  20. Review

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Edmund WongDepartment of Cell Biology, Biostatistics Core, Albert Einstein Cancer Center, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA.
Kan Yang
Mari Kuraguchi
Uwe Werling
Elena Avdievich
Kunhua Fan
Melissa Fazzari
Bo Jin
Anthony M C Brown
Martin Lipkin
Winfried Edelmann
Cornell University · USAlbert Einstein College of Medicine · USRockefeller University · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI ALYSON B MOADEL · 1985 to 2026
$111.2M
DNA MISMATCH REPAIR AND CANCER IN MURINE MODELSR01CA076329 · NCI · YESHIVA UNIVERSITY · PI EDELMANN, WINFRIED · 1998 to 2017
$6.9M
The Role of Late MMR Proteins in DNA Repair and CancerR01CA093484 · NCI · YESHIVA UNIVERSITY · PI EDELMANN, WINFRIED · 2002 to 2011
$3.7M
Wnt signaling in mammary development and cancerR01CA047207 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI BROWN, ANTHONY M.C. · 1996 to 2006
$2.0M
ACTION OF THE ONCOGENE INT-1 IN MAMMARY TUMORSR29CA047207 · NCI · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI BROWN, ANTHONY M.C. · 1988 to 1992
–
NCI NIH HHS CA13330NCI NIH HHS CA47207NCI NIH HHS CA76329NCI NIH HHS CA93484NCI NIH HHS P30 CA013330NCI NIH HHS R01 CA047207NCI NIH HHS R01 CA076329NCI NIH HHS R01 CA093484
6 · The paper itself

Abstract

Mbd4 (methyl-CpG binding domain 4) is a novel mammalian repair enzyme that has been implicated biochemically in the repair of mismatched G-T residues at methylated CpG sites. In addition, the human protein has been shown to interact with the DNA mismatch repair protein MLH1. To clarify the role of Mbd4 in DNA repair in vivo and to examine the impact of Mbd4 inactivation on gastrointestinal (GI) tumorigenesis, we introduced a null mutation into the murine Mbd4 gene by gene targeting. Heterozygous and homozygous Mbd4 mutant mice develop normally and do not show increased cancer susceptibility or reduced survival. Although Mbd4 inactivation did not increase microsatellite instability (MSI) in the mouse genome, it did result in a 2- to 3-fold increase in C-->T transition mutations at CpG sequences in splenocytes and epithelial cells of the small intestinal mucosa. The combination of Mbd4 deficiency with a germ line mutation in the adenomatous polyposis coli (Apc) gene increased the tumor number in the GI tract and accelerated tumor progression. The change in the GI cancer phenotype was associated with an increase in somatic C-->T mutations at CpG sites within the coding region of the wild-type Apc allele. These studies indicate that, although inactivation of Mbd4 does not by itself cause cancer predisposition in mice, it can alter the mutation spectrum in cancer cells and modify the cancer predisposition phenotype.

Indexed as

Frameshift MutationAnimalsBase Pair MismatchBase SequenceBlastocystChimeraCodon, TerminatorCrosses, GeneticDNA PrimersDNA ProbesDNA RepairEndodeoxyribonucleasesExonsFemaleGastrointestinal NeoplasmsMaleCodon, TerminatorDNA PrimersDNA ProbesEndodeoxyribonucleasesMbd4 protein, mouse

Identifiers

PMID12417741
PMCPMC137523
OpenAlexW2163801678

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.