Evidence map›Paper›PMID 12417715›Full record

ArticleMolecular and cellular biology2002

Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay.

Jens Lykke-Andersen

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 211 papers.

0numbers the graph read from it
0cells of the map it votes in
211citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

211 citing papers in PubMed, 358 citations in OpenAlex.

  1. Article
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  10. Review
  11. Article
  12. Application of Mammalian Nudix Enzymes to Capped RNA Analysis.Pharmaceuticals (Basel, Switzerland) · 2024
    Review
  13. Article
  14. Article
  15. Article
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  17. Article
  18. Article
  19. Processing body (P-body) and its mediators in cancer.Molecular and cellular biochemistry · 2022
    Review
  20. Eukaryotic mRNA Decapping Activation.Frontiers in genetics · 2022
    Review

151 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Jens Lykke-AndersenMolecular, Cellular and Developmental Biology, University of Colorado, Boulder, Colorado 80309, USA. Jens.Lykke-Andersen@colorado.edu
University of Colorado Boulder · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Decapping is a key step in general and regulated mRNA decay. In Saccharomyces cerevisiae it constitutes a rate-limiting step in the nonsense-mediated decay pathway that rids cells of mRNAs containing premature termination codons. Here two human decapping enzymes are identified, hDcp1a and hDcp2, as well as a homolog of hDcp1a, termed hDcp1b. Transiently expressed hDcp1a and hDcp2 proteins localize primarily to the cytoplasm and form a complex in human cell extracts. hDcp1a and hDcp2 copurify with decapping activity, an activity sensitive to mutation of critical hDcp residues. Importantly, coimmunoprecipitation assays demonstrate that hDcp1a and hDcp2 interact with the nonsense-mediated decay factor hUpf1, both in the presence and in the absence of the other hUpf proteins, hUpf2, hUpf3a, and hUpf3b. These data suggest that a human decapping complex may be recruited to mRNAs containing premature termination codons by the hUpf proteins.

Indexed as

RNA-Binding ProteinsCell LineEndoribonucleasesFungal ProteinsGene Expression RegulationHumansModels, GeneticMolecular Sequence DataMultienzyme ComplexesMutationProtein BiosynthesisRecombinant Fusion ProteinsRNA Cap-Binding ProteinsRNA, FungalRNA HelicasesRNA, MessengerDCP1A protein, humanDCP1 protein, S cerevisiaeDCP2 protein, humanDCP2 protein, S cerevisiaeEndoribonucleasesFungal ProteinsMultienzyme ComplexesNAM7 protein, S cerevisiaeRecombinant Fusion ProteinsRNA-Binding ProteinsRNA Cap-Binding ProteinsRNA, FungalRNA HelicasesRNA, MessengerSaccharomyces cerevisiae ProteinsTrans-ActivatorsUPF1 protein, human

Identifiers

PMID12417715
PMCPMC134073
OpenAlexW2135804883

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.