Evidence map›Paper›PMID 12414708›Full record

ArticleBiophysical journal2002

Structure and interactions of the carboxyl terminus of striated muscle alpha-tropomyosin: it is important to be flexible.

Norma J Greenfield, Thomas Palm, Sarah E Hitchcock-DeGregori

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 57 citations in OpenAlex.

  1. Nucleus Mechanosensing in Cardiomyocytes.International journal of molecular sciences · 2023
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Tropomyosin dynamics.Journal of muscle research and cell motility · 2014
    Review
  7. Review
  8. Article
  9. Article
  10. Tropomyosin Ser-283 pseudo-phosphorylation slows myofibril relaxation.Archives of biochemistry and biophysics · 2013
    Article
  11. Article
  12. Investigations into tropomyosin function using mouse models.Journal of molecular and cellular cardiology · 2010
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Norma J GreenfieldUniversity of Medicine and Dentistry of New Jersey-Robert Wood Johnson Medical School, 675 Hoes Lane, Piscataway, NJ 08854-5635, USA. greenfie@rwja.umdnj.edu
Thomas Palm
Sarah E Hitchcock-DeGregori
Rutgers, The State University of New Jersey · USJohnson University · US

Funding

REGULATION OF CONTRATION IN MUSCLE AND NON-MUSCLE CELLSR01GM036326 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI HITCHCOCK-DEGREGORI, SARAH ELLEN · 1985 to 2006
$2.2M
Acquisition of a Circular Dichroism SpectrometerS10RR016705 · NCRR · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI BRODSKY, BARBARA M · 2002 to 2002
$162k
NCRR NIH HHS 1S10 RR 16705-01NIGMS NIH HHS GM 36326
6 · The paper itself

Abstract

Tropomyosin (TM) binds to and regulates the actin filament. We used circular dichroism and heteronuclear NMR to investigate the secondary structure and interactions of the C terminus of striated muscle alpha-TM, a major functional determinant, using a model peptide, TM9a(251-284). The (1)H(alpha) and (13)C(alpha) chemical shift displacements show that residues 252 to 277 are alpha-helical but residues 278 to 284 are nonhelical and mobile. The (1)H(N) and (13)C' displacements suggest that residues 257 to 269 form a coiled coil. Formation of an "overlap" binary complex with a 33-residue N-terminal chimeric peptide containing residues 1 to 14 of alpha-TM perturbs the (1)H(N) and (15)N resonances of residues 274 to 284. Addition of a fragment of troponin T, TnT(70-170), to the binary complex perturbs most of the (1)H(N)-(15)N cross-peaks. In addition, there are many new cross-peaks, showing that the binding is asymmetric. Q263, in a proposed troponin T binding site, shows two sets of side-chain (15)N-(1)H cross-peaks, indicating conformational flexibility. The conformational equilibrium of the side chain changes upon formation of the binary and ternary complexes. Replacing Q263 with leucine greatly increases the stability of TM9a(251-284) and reduces its ability to form the binary and ternary complexes, showing that conformational flexibility is crucial for the binding functions of the C terminus.

Indexed as

Amino Acid SequenceAnimalsBinding SitesBiophysical PhenomenaBiophysicsCircular DichroismElectrophoresis, Polyacrylamide GelMagnetic Resonance SpectroscopyMolecular Sequence DataMuscle, SkeletalMutagenesis, Site-DirectedPeptide BiosynthesisPeptidesProtein BindingProtein ConformationProtein Structure, SecondaryPeptidesRecombinant ProteinsTropomyosin

Identifiers

PMID12414708
PMCPMC1302360
OpenAlexW2058489068

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.