Evidence map›Paper›PMID 12414685›Full record

ArticleBiophysical journal2002

Intracellular Ca(2+) release as irreversible Markov process.

Juliana Rengifo, Rafael Rosales, Adom González, Heping Cheng, Michael D Stern, Eduardo Ríos

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
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  10. Depletion "skraps" and dynamic buffering inside the cellular calcium store.Proceedings of the National Academy of Sciences of the United States of America · 2006
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  16. The quantal nature of Ca2+ sparks and in situ operation of the ryanodine receptor array in cardiac cells.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Juliana RengifoDepartment of Molecular Biophysics and Physiology, Rush University, 1750 W. Harrison Street, Chicago, IL 60612, USA.
Rafael Rosales
Adom González
Heping Cheng
Michael D Stern
Eduardo Ríos
Rush University · USInstituto Venezolano de Investigaciones Científicas · VE

Funding

Stochastic Simulation Of Excitation-contraction CouplingZIAAG000844 · NIA · NATIONAL INSTITUTE ON AGING · PI STERN, MICHAEL · 2009 to 2025
$8.7M
STOCHASTIC SIMULATION OF EXCITATION-CONTRACTION COUPLINGZ01AG000844 · NIA · NATIONAL INSTITUTE ON AGING · PI STERN, MICHAEL D · 1997 to 2008
$1.1M
6 · The paper itself

Abstract

In striated muscles, intracellular Ca(2+) release is tightly controlled by the membrane voltage sensor. Ca(2+) ions are necessary mediators of this control in cardiac but not in skeletal muscle, where their role is ill-understood. An intrinsic gating oscillation of Ca(2+) release-not involving the voltage sensor-is demonstrated in frog skeletal muscle fibers under voltage clamp. A Markov model of the Ca(2+) release units is shown to reproduce the oscillations, and it is demonstrated that for Markov processes to have oscillatory transients, its transition rates must violate thermodynamic reversibility. Such irreversibility results in permanent cycling of the units through a ring of states, which requires a source of free energy. Inhibition of the oscillation by 20 to 40 mM EGTA or partial depletion of Ca(2+) in the sarcoplasmic reticulum (SR) identifies the SR [Ca(2+)] gradient as the energy source, and indicates a location of the critical Ca(2+)-sensing site at distances greater than 35 nm from the open channel. These results, which are consistent with a recent demonstration of irreversibility in gating of cardiac Ca(2+) sparks, (Wang, S.-Q., L.-S. Song, L. Xu, G. Meissner, E. G. Lakatta, E. Ríos, M. D. Stern, and H. Cheng. 2002. Biophys. J. 83:242-251) exemplify a cell-wide oscillation caused by coupling between ion permeation and channel gating.

Indexed as

AlgorithmsAnimalsBiophysical PhenomenaBiophysicsCalciumChelating AgentsDose-Response Relationship, DrugEgtazic AcidMarkov ChainsModels, StatisticalMusclesOscillometryRana pipiensRyanodine Receptor Calcium Release ChannelSarcoplasmic ReticulumThermodynamicsCalciumChelating AgentsEgtazic AcidRyanodine Receptor Calcium Release Channel

Identifiers

PMID12414685
PMCPMC1302337
OpenAlexW2013560023

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.