Evidence map›Paper›PMID 12411497›Full record

ArticleThe EMBO journal2002

Selective interaction between the chromatin-remodeling factor BRG1 and the heterochromatin-associated protein HP1alpha.

Anders Lade Nielsen, Cecilia Sanchez, Hiroshi Ichinose, Margarita Cerviño, Thierry Lerouge, Pierre Chambon, Régine Losson

Abstract read
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
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  9. Article
  10. Review
  11. Article
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  14. Article
  15. The role of epigenetics in the pathology of diabetic complications.American journal of physiology. Renal physiology · 2010
    Review
  16. Epigenetics of diabetic complications.Expert review of endocrinology & metabolism · 2010
    Article
  17. Article
  18. Article
  19. Diverse roles of HP1 proteins in heterochromatin assembly and functions in fission yeast.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anders Lade NielsenInstitut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS/INSERM/ULP/Collège de France, BP10142, 67404 Illkirch cedex, France.
Cecilia Sanchez
Hiroshi Ichinose
Margarita Cerviño
Thierry Lerouge
Pierre Chambon
Régine Losson

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mammalian heterochromatin protein 1 (HP1) alpha, HP1beta and HP1gamma are closely related non-histone chromosomal proteins that function in gene silencing, presumably by organizing higher order chromatin structures. Here, we show by co-immunoprecipitation that HP1alpha, but neither HP1beta nor HP1gamma, forms a complex with the BRG1 chromatin-remodeling factor in HeLa cells. In vitro, BRG1 interacts directly and preferentially with HP1alpha. The region conferring this preferential binding has been mapped to residues 106-180 of the HP1alpha C-terminal chromoshadow domain. Using site-directed mutagenesis, we have identified three amino acid residues I113, A114 and C133 in HP1alpha (K, P and S in HP1beta and HP1gamma) that are essential for the selective interaction of HP1alpha with BRG1. Interestingly, these residues were also shown to be critical for the silencing activity of HP1alpha. Taken together, these results demonstrate that mammalian HP1 proteins are biochemically distinct and suggest an entirely novel function for BRG1 in modulating HP1alpha-containing heterochromatic structures.

Indexed as

Chromosomal Proteins, Non-HistoneAmino Acid SequenceCarrier ProteinsChromobox Protein Homolog 5DNA HelicasesHeLa CellsHeterochromatinHumansMolecular Sequence DataMutagenesis, Site-DirectedNuclear ProteinsPrecipitin TestsProtein BindingSequence Homology, Amino AcidTranscription FactorsCarrier ProteinsCBX1 protein, humanCBX5 protein, humanChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDNA HelicasesHeterochromatinNuclear ProteinsSMARCA4 protein, humanTranscription Factors

Identifiers

PMID12411497
PMCPMC131057

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.