Evidence map›Paper›PMID 12406763›Full record

ArticleApplied and environmental microbiology2002

Use of the alr gene as a food-grade selection marker in lactic acid bacteria.

Peter A Bron, Marcos G Benchimol, Jolanda Lambert, Emmanuelle Palumbo, Marie Deghorain, Jean Delcour, Willem M De Vos, Michiel Kleerebezem, Pascal Hols

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 91 citations in OpenAlex.

  1. Review
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  11. Review
  12. Construction of a shuttle expression vector for lactic acid bacteria.Journal, genetic engineering & biotechnology · 2019
    Article
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  19. Development ofVaccines · 2014
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Peter A BronWageningen Centre for Food Sciences, 6700 AN Wageningen, The Netherlands.
Marcos G Benchimol
Jolanda Lambert
Emmanuelle Palumbo
Marie Deghorain
Jean Delcour
Willem M De Vos
Michiel Kleerebezem
Pascal Hols
UCLouvain · BEWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Both Lactococcus lactis and Lactobacillus plantarum contain a single alr gene, encoding an alanine racemase (EC 5.1.1.1), which catalyzes the interconversion of D-alanine and L-alanine. The alr genes of these lactic acid bacteria were investigated for their application as food-grade selection markers in a heterologous complementation approach. Since isogenic mutants of both species carrying an alr deletion (Deltaalr) showed auxotrophy for D-alanine, plasmids carrying a heterologous alr were constructed and could be selected, since they complemented D-alanine auxotrophy in the L. plantarum Deltaalr and L. lactis Deltaalr strains. Selection was found to be highly stringent, and plasmids were stably maintained over 200 generations of culturing. Moreover, the plasmids carrying the heterologous alr genes could be stably maintained in wild-type strains of L. plantarum and L. lactis by selection for resistance to D-cycloserine, a competitive inhibitor of Alr (600 and 200 micro g/ml, respectively). In addition, a plasmid carrying the L. plantarum alr gene under control of the regulated nisA promoter was constructed to demonstrate that D-cycloserine resistance of L. lactis is linearly correlated to the alr expression level. Finally, the L. lactis alr gene controlled by the nisA promoter, together with the nisin-regulatory genes nisRK, were integrated into the chromosome of L. plantarum Deltaalr. The resulting strain could grow in the absence of D-alanine only when expression of the alr gene was induced with nisin.

Indexed as

Neoplasm ProteinsAnti-Bacterial AgentsBacterial Physiological PhenomenaBacteriocinsCycloserineDNA-Binding ProteinsFood PreferencesGenetic Complementation TestLactococcus lactisNisinAnti-Bacterial AgentsBacteriocinsCycloserineDNA-Binding ProteinsKMT2D protein, humanNeoplasm ProteinsNisinplantaricin UG1

Identifiers

PMID12406763
PMCPMC129899
OpenAlexW2148093277

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.