Evidence map›Paper›PMID 12406737›Full record

ArticleApplied and environmental microbiology2002

Characterization of six Leuconostoc fallax bacteriophages isolated from an industrial sauerkraut fermentation.

Rodolphe Barrangou, Sung-Sik Yoon, Frederick Breidt, Henry P Fleming, Todd R Klaenhammer

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 71 citations in OpenAlex.

  1. Statistical structure of host-phage interactions.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Pooled it
  2. Article
  3. Review
  4. A New Approach for ControllingPlants (Basel, Switzerland) · 2022
    Article
  5. Characterization of Prophages inJournal of microbiology and biotechnology · 2022
    Article
  6. Review
  7. Article
  8. Profile of Rodolphe Barrangou.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. Genomic Characterization of Dairy AssociatedFrontiers in microbiology · 2017
    Article
  10. Article
  11. Review
  12. Review
  13. Bacteriophage ecology in a commercial cucumber fermentation.Applied and environmental microbiology · 2012
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. The theoretical basis of universal identification systems for bacteria and viruses.Journal of biological physics and chemistry : JBPC · 2005
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Rodolphe BarrangouSoutheast Dairy Foods Research Center, Department of Food Science, North Carolina State University, Raleigh, North Carolina 27695, USA.
Sung-Sik Yoon
Frederick Breidt
Henry P Fleming
Todd R Klaenhammer
North Carolina State University · USAgricultural Research Service · USYonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Six bacteriophages active against Leuconostoc fallax strains were isolated from industrial sauerkraut fermentation brines. These phages were characterized as to host range, morphology, structural proteins, and genome fingerprint. They were exclusively lytic against the species L. fallax and had different host ranges among the strains of this species tested. Morphologically, three of the phages were assigned to the family Siphoviridae, and the three others were assigned to the family Myovidae: Major capsid proteins detected by electrophoresis were distinct for each of the two morphotypes. Restriction fragment length polymorphism analysis and randomly amplified polymorphic DNA fingerprinting showed that all six phages were genetically distinct. These results revealed for the first time the existence of bacteriophages that are active against L. fallax and confirmed the presence and diversity of bacteriophages in a sauerkraut fermentation. Since a variety of L. fallax strains have been shown to be present in sauerkraut fermentation, bacteriophages active against L. fallax are likely to contribute to the microbial ecology of sauerkraut fermentation and could be responsible for some of the variability observed in this type of fermentation.

Indexed as

Genome, ViralBacteriophagesDNA FingerprintingDNA, ViralFermentationLeuconostocPolymorphism, Restriction Fragment LengthRandom Amplified Polymorphic DNA TechniqueViral ProteinsDNA, ViralViral Proteins

Identifiers

PMID12406737
PMCPMC129880
OpenAlexW2121489118

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.