Evidence map›Paper›PMID 12397183›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Origin of plant glycerol transporters by horizontal gene transfer and functional recruitment.

Rafael Zardoya, Xiaodong Ding, Yoshichika Kitagawa, Maarten J Chrispeels

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Evolutionary Overview of Aquaporin Superfamily.Advances in experimental medicine and biology · 2023
    Article
  7. Review
  8. Article
  9. Horizontal Gene Transfer Involving Chloroplasts.International journal of molecular sciences · 2021
    Review
  10. Article
  11. Article
  12. Article
  13. Phytolith Formation in Plants: From Soil to Cell.Plants (Basel, Switzerland) · 2019
    Review
  14. Plant and Mammal Aquaporins: Same but Different.International journal of molecular sciences · 2018
    Review
  15. Article
  16. The Roles of Aquaporins in Plant Stress Responses.Journal of developmental biology · 2016
    Review
  17. Overexpression of a Barley Aquaporin Gene,Frontiers in plant science · 2016
    Article
  18. Four hundred million years of silica biomineralization in land plants.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Rafael ZardoyaDepartamento de Biodiversidad y Biologia Evolutiva, Museo Nacional de Ciencias Naturales, José Gutierrez Abascal 2, 28006 Madrid, Spain. rafaz@mncn.csic.es
Xiaodong Ding
Yoshichika Kitagawa
Maarten J Chrispeels
Akita Prefectural University · JPMuseo Nacional de Ciencias Naturales · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene-family evolution mostly relies on gene duplication coupled with functional diversification of gene products. However, other evolutionary mechanisms may also be important in generating protein diversity. The ubiquitous membrane intrinsic protein (MIP) gene family is an excellent model system to search for such alternative evolutionary mechanisms. MIPs are proteins that transport water, glycerol, and small solutes across cell membranes in all living organisms. We reconstructed the molecular phylogeny of MIPs based on amino acid sequence data by using neighbor-joining, maximum-likelihood, and Bayesian methods of phylogenetic inference. The recovered trees show an early and distinct separation of water and glycerol transporters, i.e., aquaporins (AQPs), and aquaglyceroporins. The latter are absent from plants. As expected, gene duplication and functional diversification account for most of the diversity of animal and plant members of the family. However, in contrast to this model, we find that the sister group of plant glycerol transporters are bacterial AQPs. This relationship suggests first that plant glycerol transporters may resulted from a single event of horizontal gene transfer from bacteria, which we have estimated to have occurred approximately 1,200 million years ago, at the origin of plants, and second that bacterial AQPs were likely recruited to transport glycerol in plants because of their absence of aquaglyceroporins. This striking example of adaptive evolution at the molecular level was demonstrated further by finding convergent or parallel replacements at particular amino acid positions related to water- and glycerol-transporting specificity.

Indexed as

Amino Acid SequenceCarrier ProteinsConsensus SequenceConserved SequenceEvolution, MolecularGene Transfer TechniquesGlycerolMolecular Sequence DataPhylogenyPlantsSequence AlignmentSequence Homology, Amino AcidCarrier ProteinsGlycerol

Identifiers

PMID12397183
PMCPMC137515
OpenAlexW2035294304

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.