Evidence map›Paper›PMID 12392596›Full record

ArticleMolecular cancer2002

Mapping common deleted regions on 5p15 in cervical carcinoma and their occurrence in precancerous lesions.

Hugo Arias-Pulido, Gopeshwar Narayan, Hernan Vargas, Mahesh Mansukhani, Vundavalli V V S Murty

Open access · goldAbstract read
In one paragraph

Article in Molecular cancer, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Hugo Arias-PulidoDepartment of Pathology, College of Physicians & Surgeons of Columbia University, 630 West 168th Street, New York, 10032, USA. harias59@yahoo.com
Gopeshwar Narayan
Hernan Vargas
Mahesh Mansukhani
Vundavalli V V S Murty
Columbia University · USInstituto Nacional de Cancerología · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrevious studies have shown that the short arm of chromosome 5 (5p) exhibit frequent genetic changes in invasive cervical carcinoma (CC), and that these changes arise early during the carcinogenesis, in precancerous lesions. These data therefore suggest that loss of candidate tumor suppressor genes located on 5p is associated with the development of CC. However, the precise location of 5p deletions is not known.

resultsWe performed a detailed deletion mapping of 5p in 60 cases of invasive CC. We found that 60% of the tumors exhibit a 5p loss of heterozygosity (LOH). The patterns of LOH allowed us to identify two minimal regions of deletions, one at 5p15.3 spanning a 5.5 cM genetic distance and a second site of 7 cM at 5p15.2-15.3. In addition, we also identified 5p deletions in 16% lesions of high-grade cervical intraepithelial neoplasia (CIN). 5p LOH was found in 63% of HPV 16 positive tumors, while only 33% tumors with other HPV-types had 5p LOH. The differences in frequency of 5p LOH between tumors harboring HPV16 in combination with other HPV types and tumors harboring HPV16 DNA alone were significantly higher, suggesting a synergistic effect of high-risk types in causing genomic instability.

conclusionThese findings implicate the presence of tumor suppressor gene(s) on 5p relevant to CC tumorigenesis.

Indexed as

Chromosome DeletionPhysical Chromosome MappingCell Line, TumorChromosomes, Human, Pair 5FemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGenes, Tumor SuppressorHumansLoss of HeterozygosityPapillomaviridaePrecancerous ConditionsUterine Cervical Neoplasms

Identifiers

PMID12392596
PMCPMC140145
OpenAlexW2165476199

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.