Evidence map›Paper›PMID 12384598›Full record

ArticleNucleic acids research2002

Induction of sporulation in Saccharomyces cerevisiae leads to the formation of N6-methyladenosine in mRNA: a potential mechanism for the activity of the IME4 gene.

Mary J Clancy, Mary Eileen Shambaugh, Candace S Timpte, Joseph A Bokar

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 175 papers.

0numbers the graph read from it
0cells of the map it votes in
175citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

175 citing papers in PubMed, 312 citations in OpenAlex.

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115 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mary J ClancyDepartment of Biological Sciences, University of New Orleans, New Orleans, LA 70148, USA.
Mary Eileen Shambaugh
Candace S Timpte
Joseph A Bokar
University of New Orleans · US

Funding

FUNCTIONAL ROLE OF N6 METHYLADENOSINE IN EUKARYOTIC MRNAR29CA077472 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI BOKAR, JOSEPH A · 1998 to 2002
$321k
NCI NIH HHS CA77472
6 · The paper itself

Abstract

N6-methyladenosine (m6A) is present at internal sites in mRNA isolated from all higher eukaryotes, but has not previously been detected in the mRNA of the yeast Saccharomyces cerevisiae. This nucleoside modification occurs only in a sequence- specific context that appears to be conserved across diverse species. The function of this modification is not fully established, but there is some indirect evidence that m6A may play a role in the efficiency of mRNA splicing, transport or translation. The S.cerevisiae gene IME4, which is important for induction of sporulation, is very similar to the human gene MT-A70, which has been shown to be a critical subunit of the human mRNA [N6-adenosine]-methyltransferase. This observation led to the hypothesis that yeast sporulation may be dependent upon methylation of yeast mRNA, mediated by Ime4p. In this study we show that induction of sporulation leads to the appearance of low levels of m6A in yeast mRNA and that this modification requires IME4. Moreover, single amino acid substitutions in the putative catalytic residues of Ime4p lead to severe sporulation defects in a strain whose sporulation ability is completely dependent on this protein. Collectively, these data suggest very strongly that the activation of sporulation by Ime4p is the result of its proposed methyltransferase activity and provide the most direct evidence to date of a physiologic role of m6A in a gene regulatory pathway.

Indexed as

Saccharomyces cerevisiae ProteinsTranscription FactorsAdenosineAmino Acid MotifsAmino Acid SequenceAnimalsChromatography, High Pressure LiquidConserved SequenceFungal ProteinsGenes, FungalHumansKineticsMeiosisMethyltransferasesMolecular Sequence DataMutagenesis, Site-DirectedAdenosineFungal ProteinsIME1 protein, S cerevisiaeMethyltransferasesMETTL3 protein, humanmRNA (2'-O-methyladenosine-N6-)-methyltransferaseN-methyladenosineNuclear ProteinsNucleosidesRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID12384598
PMCPMC137137
OpenAlexW1970460195

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.