Evidence map›Paper›PMID 12384596›Full record

ArticleNucleic acids research2002

Gene expression of TPA induced differentiation in HL-60 cells by DNA microarray analysis.

Xi Zheng, Roald Ravatn, Yong Lin, Wei-Chung Shih, Arnold Rabson, Roger Strair, Eliezer Huberman, Allan Conney, Khew-Voon Chin

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
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  13. Effects of cardiotonic steroids on dermal collagen synthesis and wound healing.Journal of applied physiology (Bethesda, Md. : 1985) · 2008
    Article
  14. Article
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  16. PDE1B2 regulates cGMP and a subset of the phenotypic characteristics acquired upon macrophage differentiation from a monocyte.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  17. Article
  18. Current awareness on comparative and functional genomics.Comparative and functional genomics · 2003
    Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Xi ZhengLaboratory for Cancer Research, Department of Chemical Biology, College of Pharmacy, Rutgers, The State University of New Jersey, Piscataway, NJ 08854-8020, USA.
Roald Ravatn
Yong Lin
Wei-Chung Shih
Arnold Rabson
Roger Strair
Eliezer Huberman
Allan Conney
Khew-Voon Chin
Rutgers, The State University of New Jersey · US

Funding

TUMOR PROMOTER MACROPHAGE DIFFERENTIATION AND APOPTOSISR01CA080826 · NCI · UNIVERSITY OF CHICAGO · PI HUBERMAN, ELIEZER · 2000 to 2003
$1.3M
NCI NIH HHS CA 80826NCI NIH HHS R01 CA080826
6 · The paper itself

Abstract

The tumor promoter 12-O-tetradecanoylphorbol-13-acetate (TPA) is a potent inducer of differentiation in human promyelocytic leukemia cells. Recently, TPA has been successfully administered to patients with myelocytic leukemia and has produced therapeutic effects that led to temporary remission. These studies demonstrated the potential efficacy of TPA in cancer chemotherapy. We now seek to understand the biological effects and molecular mechanisms of differentiation in response to TPA treatment in leukemia cells by expression profiling using DNA microarray. Our results show distinct temporal and coordinated gene changes that are consistent with differentiation and activation of multiple biochemical pathways in HL-60 cells exposed to TPA. Alterations of gene expression in HL-60 cells include various transcription factors, cytokines and protein markers that are consistent with the induction of differentiation elicited by TPA. These temporal patterns of gene expression were abolished or greatly diminished in an HL-60 derived TPA- resistant variant cell line (HL-525), thus revealing transcriptional and consequential biochemical changes that may be required for TPA-induced differentiation. In addition, certain genes were upregulated by TPA in TPA-resistant HL-525 cells but not in TPA-sensitive HL-60 cells suggesting that these genes may play a role in the resistant phenotype. These patterns of gene expression may be important for predicting response to TPA.

Indexed as

Antineoplastic AgentsCell DifferentiationDrug Resistance, NeoplasmGene Expression ProfilingHL-60 CellsHumansKineticsLeukemia, MyeloidOligonucleotide Array Sequence AnalysisRNA, NeoplasmTetradecanoylphorbol AcetateAntineoplastic AgentsRNA, NeoplasmTetradecanoylphorbol Acetate

Identifiers

PMID12384596
PMCPMC137144
OpenAlexW2082333366

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.