Evidence map›Paper›PMID 12384588›Full record

ArticleNucleic acids research2002

Expression of the human RNA-binding protein HuR in Trypanosoma brucei increases the abundance of mRNAs containing AU-rich regulatory elements.

Luis Quijada, Cristina Guerra-Giraldez, Maciej Drozdz, Claudia Hartmann, Henriette Irmer, Claudia Ben-Dov, Marina Cristodero, Martina Ding, Christine Clayton

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 59 citations in OpenAlex.

  1. Life stage-specific poly(A) site selection regulated byProceedings of the National Academy of Sciences of the United States of America · 2024
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  12. Gene expression in trypanosomatid parasites.Journal of biomedicine & biotechnology · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Luis QuijadaZMBH, Im Neuenheimer Feld 282, D-69120 Heidelberg, Germany.
Cristina Guerra-Giraldez
Maciej Drozdz
Claudia Hartmann
Henriette Irmer
Claudia Ben-Dov
Marina Cristodero
Martina Ding
Christine Clayton
DKFZ-ZMBH Alliance · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The salivarian trypanosome Trypanosoma brucei infects mammals and is transmitted by tsetse flies. The mammalian 'bloodstream form' trypanosome has a variant surface glycoprotein coat and relies on glycolysis while the procyclic form from tsetse flies has EP protein on the surface and has a more developed mitochondrion. We show here that the mRNA for the procyclic-specific cytosolic phosphoglycerate kinase PGKB, like that for EP proteins, contains a regulatory AU-rich element (ARE) that destabilises the mRNA in bloodstream forms. The human HuR protein binds to, and stabilises, mammalian mRNAs containing AREs. Expression of HuR in bloodstream-form trypanosomes resulted in growth arrest and in stabilisation of the EP, PGKB and pyruvate, phosphate dikinase mRNAs, while three bloodstream-specific mRNAs were reduced in abundance. The synthesis and abundance of unregulated mRNAs and proteins were unaffected. Our results suggest that regulation of mRNA stability by AREs arose early in eukaryotic evolution.

Indexed as

3' Untranslated RegionsAntigens, SurfaceRNA StabilityAdenineAnimalsBase SequenceELAV-Like Protein 1ELAV ProteinsGene Expression Regulation, DevelopmentalHumansMolecular Sequence DataPhosphoglycerate KinaseProtozoan ProteinsRegulatory Sequences, Nucleic AcidRNA-Binding ProteinsRNA, Messenger3' Untranslated RegionsAdenineAntigens, SurfaceELAVL1 protein, humanELAV-Like Protein 1ELAV ProteinsPhosphoglycerate KinaseProtozoan ProteinsRNA-Binding ProteinsRNA, MessengerRNA, ProtozoanUracil

Identifiers

PMID12384588
PMCPMC137141
OpenAlexW2101261160

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.