Evidence map›Paper›PMID 12381786›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development.

Lan Chen, Daniel Segal, Neil A Hukriede, Alexandre V Podtelejnikov, Dashzeveg Bayarsaihan, James A Kennison, Vasily V Ogryzko, Igor B Dawid, Heiner Westphal

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
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  5. Crystal structure of human LDB1 in complex with SSBP2.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  6. Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Lan ChenLaboratory of Mammalian Genes and Development, and Laboratory of Molecular Genetics, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20814, USA.
Daniel Segal
Neil A Hukriede
Alexandre V Podtelejnikov
Dashzeveg Bayarsaihan
James A Kennison
Vasily V Ogryzko
Igor B Dawid
Heiner Westphal
National Institutes of Health · USTel Aviv University · IL

Funding

Mammalian Developmental Genetics and Stem CellsZIAHD000071 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI WESTPHAL, HEINER · 2009 to 2012
$8.5M
REGULATION OF GENE EXPRESSION IN THE ADENOVIRUS SYSTEM AND IN TRANSGENIC MICEZ01HD000071 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI WESTPHAL, HEINER · 1985 to 2008
$4.4M
6 · The paper itself

Abstract

The LIM-domain-binding protein Ldb1 is a key factor in the assembly of transcriptional complexes involving LIM-homeodomain proteins and other transcription factors that regulate animal development. We identified Ssdp proteins (previously described as sequence-specific, single-stranded-DNA-binding proteins) as components of Ldb1-associated nuclear complexes in HeLa cells. Ssdp proteins are associated with Ldb1 in a variety of additional mammalian cell types. This association is specific, does not depend on the presence of nucleic acids, and is functionally significant. Genes encoding Ssdp proteins are well conserved in evolution from Drosophila to humans. Whereas the vertebrate Ssdp gene family has several closely related members, the Drosophila Ssdp gene is unique. In Xenopus, Ssdp encoded by Drosophila Ssdp or mouse Ssdp1 mRNA enhances axis induction by Ldb1 in conjunction with the LIM-homeobox gene Xlim1. Furthermore, we were able to demonstrate an interaction between Ssdp and Chip (the fly homolog of Ldb1) in Drosophila wing development. These findings indicate functional conservation of Ssdp as a cofactor of Ldb1 during invertebrate and vertebrate development.

Indexed as

Ubiquitin-Protein LigasesXenopus Proteins3T3 CellsAmino Acid SequenceAnimalsChlorocebus aethiopsCOS CellsDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsHeLa CellsHomeodomain ProteinsHumansLIM Domain ProteinsLIM-Homeodomain ProteinsMiceChi protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsHomeodomain ProteinsLDB1 protein, humanLdb1 protein, mouseLHX1 protein, humanLhx1 protein, mouseLhx1 protein, XenopusLIM Domain ProteinsLIM-Homeodomain ProteinsMitochondrial ProteinsNABP2 protein, humanNuclear ProteinsSsbp2 protein, mouseSSBP3 protein, humanSsbp3 protein, mouseSsdp protein, DrosophilaSTUB1 protein, humanTranscription FactorsUbiquitin-Protein LigasesXenopus ProteinsXLdb1 protein, XenopusZyxinZyx protein, Drosophila

Identifiers

PMID12381786
PMCPMC137882
OpenAlexW2147946657

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.