Evidence map›Paper›PMID 12378614›Full record

ArticleWorld journal of gastroenterology2002

Identification of differentially expressed proteins between human esophageal immortalized and carcinomatous cell lines by two-dimensional electrophoresis and MALDI-TOF-mass spectrometry.

Xing-Dong Xiong, Li-Yan Xu, Zhong-Ying Shen, Wei-Jia Cai, Jian-Min Luo, Ya-Li Han, En-Min Li

Abstract read
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Article in World journal of gastroenterology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

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0cells of the map it votes in
8citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Proteomic analysis of pleural effusion from lung adenocarcinoma patients by shotgun strategy.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2014
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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Xing-Dong XiongDepartment of Biochemistry and Molecular Biology, Shantou University Medical College, Shantou 515031, Guangdong Province, China.
Li-Yan Xu
Zhong-Ying Shen
Wei-Jia Cai
Jian-Min Luo
Ya-Li Han
En-Min Li

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo identify the differentially expressed proteins between the human immortalized esophageal epithelial cell line (SHEE) and the malignant transformed esophageal carcinoma cell line (SHEEC), and to explore new ways for studying esophageal carcinoma associated genes.

methodsSHEE and SHEEC cell lines were used to separate differentially expressed proteins by two-dimensional electrophoresis. The silver-stained 2-D gels was scanned with EDAS290 digital camera system and analyzed with the PDQuest 6.2 Software. Six spots in which the differentially expressed protein was more obvious were selected and analyzed with matrix-assisted laser desorption/ionization time of flying mass spectrometry (MALDI-TOF-MS).

resultsThere were 107+/-4.58 and 115+/-9.91 protein spots observed in SHEE and SHEEC respectively, and the majority of these spots between the two cell lines matched each other (r=0.772), only a few were expressed differentially. After analyzed by MALDI-TOF-MS and database search for the six differentially expressed proteins, One new protein as well as other five sequence-known proteins including RNPEP-like protein, human rRNA gene upstream sequence binding transcription factor, uracil DNA glycosylase, Annexin A2 and p300/CBP-associated factor were preliminarily identified.

conclusionThese differentially expressed proteins might play an importance role during malignant transformation of SHEEC from SHEE. The identification of these proteins may serve as a new way for studying esophageal carcinoma associated genes.

Indexed as

Cell Line, TransformedElectrophoresis, Gel, Two-DimensionalEsophageal NeoplasmsGene Expression Regulation, NeoplasticHumansNeoplasm ProteinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationNeoplasm Proteins

Identifiers

PMID12378614
PMCPMC4656560

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.