Evidence map›Paper›PMID 12377807›Full record

ArticleGut2002

Gastroprotective peptide trefoil factor family 2 gene is activated by upstream stimulating factor but not by c-Myc in gastrointestinal cancer cells.

E Al-azzeh, O Dittrich, J Vervoorts, N Blin, P Gött, B Lüscher

Open access · bronzeAbstract read
In one paragraph

Article in Gut, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

E Al-azzehDivson of Molecular Genetics, Institute of Anthropology and Human Genetics, University of Tübingen, Tübingen, Germany.
O Dittrich
J Vervoorts
N Blin
P Gött
B Lüscher
University of Tübingen · DEMedizinische Hochschule Hannover · DEBioChem Technology (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDamage to the gastrointestinal mucosa results in the acute up-regulation of the trefoil factor family peptides TFF1, TFF2, and TFF3. They possess protective, healing, and tumour suppressive functions. Little is known about the regulation of TFF gene expression. The promoters of all three TFF genes contain binding sites (E box) for upstream stimulating factor (USF) and Myc/Max/Mad network proteins.

aimsTo determine the nature and function of transcription factors that bind to these E boxes and to understand their role for TFF gene expression.

methodsTFF promoter activities were determined by reporter gene assays. DNA binding was monitored by electromobility shift assays and by chromatin immunoprecipitation analyses. Expression of endogenous TFF was determined by multiplex RT-PCR.

resultsIt was observed that the TFF2 promoter is specifically and efficiently activated by USF transcription factors but not by c-Myc. USF displayed comparable binding to a high affinity Myc/Max binding site compared with the three TFF E boxes, while c-Myc exhibited lower affinity to the TFF E boxes. In contrast, pronounced binding differences were observed in cells with a strong preference for USF to interact specifically with the TFF2 E box, while Myc was not above background. Exogenous expression of USF was sufficient to activate the chromosomal TFF2 and to a lesser extent, the TFF1 gene.

conclusionThese findings define USF factors as regulators of the TFF2 gene and suggest that promoter specific effects are important for a pronounced gene activation of this cytoprotective peptide.

Indexed as

DNA-Binding ProteinsGene Expression RegulationMucinsMuscle ProteinsNeuropeptidesPromoter Regions, GeneticBinding SitesElectrophoretic Mobility Shift AssayGastrointestinal NeoplasmsGrowth SubstancesHumansPeptidesPrecipitin TestsProto-Oncogene Proteins c-mycReverse Transcriptase Polymerase Chain ReactionTranscriptional ActivationDNA-Binding ProteinsGrowth SubstancesMucinsMuscle ProteinsMYC protein, humanNeuropeptidesPeptidesProto-Oncogene Proteins c-mycTFF2 protein, humanTff2 protein, ratTFF3 protein, ratTranscription FactorsTrefoil Factor-2Trefoil Factor-3Upstream Stimulatory FactorsUSF1 protein, human

Identifiers

PMID12377807
PMCPMC1773432
OpenAlexW2095445907

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.