Evidence map›Paper›PMID 12374846›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

A synthetic HIV-1 Rev inhibitor interfering with the CRM1-mediated nuclear export.

Dirk Daelemans, Elena Afonina, Jakob Nilsson, Gudrun Werner, Jorgen Kjems, Erik De Clercq, George N Pavlakis, Anne-Mieke Vandamme

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Measurement of HIV Rev-Rev Response Element Functional Activity.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  10. Article
  11. Article
  12. HibeRNAtion: HIV-1 RNA Metabolism and Viral Latency.Frontiers in cellular and infection microbiology · 2022
    Review
  13. Article
  14. Article
  15. Crystal structure of human CRM1, covalently modified by 2-mercaptoethanol on Cys528, in complex with RanGTP.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
  16. Article
  17. 10 years into the resurgence of covalent drugs.Future medicinal chemistry · 2021
    Article
  18. Article
  19. Review
  20. Small Molecule Inhibitors of CRM1.Frontiers in pharmacology · 2020
    Review

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Dirk DaelemansRega Institute for Medical Research, Katholieke Universiteit Leuven, B-3000 Leuven, Belgium. ddaelemans@mail.nifcrf.gov
Elena Afonina
Jakob Nilsson
Gudrun Werner
Jorgen Kjems
Erik De Clercq
George N Pavlakis
Anne-Mieke Vandamme
Novartis (Austria) · ATRega Institute for Medical Research · BEKU Leuven · BENational Cancer Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The HIV-1 Rev protein is an essential regulator of the HIV-1 mRNA expression that promotes the export of unspliced and partially spliced mRNA. The export receptor for the leucine-rich nuclear export signal (NES) of Rev has recently been recognized as CRM1. We identified a low molecular weight compound PKF050-638 as an inhibitor of HIV-1 Rev. This drug inhibits in a dose-dependent fashion Rev-dependent mRNA expression in a cellular assay for Rev function. We show that PKF050-638 is an inhibitor of the CRM1-mediated Rev nuclear export. By using a quantitative in vitro CRM1-NES cargo-binding assay, we could demonstrate that PKF050-638 disrupts CRM1-NES interaction. This mode of action is confirmed in cell culture because the drug reversibly interferes with the colocalization of CRM1 and Rev in the nucleolus of the cell. In addition, we prove that the inhibition is through direct interaction of the compound with Cys-539 of CRM1. These effects are similar to those of the known CRM1 inhibitor leptomycin B and suggest that the inhibitory effect of the compound is caused by binding to CRM1 at a similar site. The compound displayed strict structural requirements for its activity, as its enantiomer was inactive in all assays tested. These results show that we identified a drug that interferes with the CRM1-mediated nuclear export of Rev through inhibition of the CRM1-NES complex formation. The reversibility of its binding to CRM1 and its availability through chemical synthesis could make it useful for studying CRM1-mediated export pathways.

Indexed as

Receptors, Cytoplasmic and NuclearActive Transport, Cell NucleusBinding SitesCell NucleusExportin 1 ProteinGene ExpressionGene Products, revGenes, ReporterHeLa CellsHIV-1HumansJurkat CellsKaryopherinsLuciferasesMolecular Structureran GTP-Binding ProteinExportin 1 ProteinGene Products, revKaryopherinsLuciferasesPKF 050-638ran GTP-Binding ProteinReceptors, Cytoplasmic and Nuclearrev Gene Products, Human Immunodeficiency VirusTriazoles

Identifiers

PMID12374846
PMCPMC137902
OpenAlexW1985510335

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.