Evidence map›Paper›PMID 12374826›Full record

ArticleJournal of bacteriology2002

DNA inversion on conjugative plasmid pVT745.

Jinbiao Chen, Donald J Leblanc, Dominique M Galli

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Mpi recombinase globally modulates the surface architecture of a human commensal bacterium.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Jinbiao ChenSchool of Dentistry, Department of Oral Biology, Indiana University, 1121 W. Michigan Street, Indianapolis, IN 46202, USA.
Donald J Leblanc
Dominique M Galli
Indiana University – Purdue University Indianapolis · USEli Lilly (United States) · US

Funding

PLASMID BIOLOGY OF ACTINOBACILLUS ACTINOMYCETEMCOMITANSR01DE012107 · NIDCR · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI GALLI, DOMINIQUE M · 1996 to 2003
$1.0M
NIDCR NIH HHS R01 DE012107NIDCR NIH HHS R01 DE 12107
6 · The paper itself

Abstract

Plasmid pVT745 from Actinobacillus actinomycetemcomitans strain VT745 can be transferred to other A. actinomycetemcomitans strains at a frequency of 10(-6). Screening of transconjugants revealed that the DNA of pDMG21A, a pVT745 derivative containing a kanamycin resistance gene, displayed a structural rearrangement after transfer. A 9-kb segment on the plasmid had switched orientation. The inversion was independent of RecA and required the activity of the pVT745-encoded site-specific recombinase. This recombinase, termed Inv, was highly homologous to invertases of the Din family. Two recombination sites of 22 bp, which are arranged in opposite orientation and which function as DNA crossover sequences, were identified on pVT745. One of the sites was located adjacent to the 5' end of the invertase gene, inv. Inversion of the 9-kb segment on pVT745 derivatives has been observed in all A. actinomycetemcomitans strains tested except for the original host, VT745. This would suggest that a host factor that is either inactive or absent in VT745 is required for efficient recombination. Inactivation of the invertase in the donor strain resulted in a 1,000-fold increase in the number of transconjugants upon plasmid transfer. It is proposed that an activated invertase causes the immediate loss of the plasmid in most recipient cells after mating. No biological role has been associated with the invertase as of yet.

Indexed as

Bacterial ProteinsChromosome InversionConjugation, GeneticDNA, BacterialDNA-Binding ProteinsPlasmidsAggregatibacter actinomycetemcomitansAmino Acid SequenceDNA NucleotidyltransferasesGene ExpressionGenes, BacterialMolecular Sequence DataRec A RecombinasesSequence Homology, Amino AcidBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDNA invertase GinDNA Nucleotidyltransferasesmin recombinaseRecA protein, Acinetobacter calcoaceticusRec A Recombinases

Identifiers

PMID12374826
PMCPMC135377
OpenAlexW2118010092

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.