Evidence map›Paper›PMID 12374752›Full record

ArticleThe EMBO journal2002

Pre-spliceosome formation in S.pombe requires a stable complex of SF1-U2AF(59)-U2AF(23).

Tao Huang, Josep Vilardell, Charles C Query

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
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  3. Review
  4. Review
  5. Article
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  7. Article
  8. Diverse regulation of 3' splice site usage.Cellular and molecular life sciences : CMLS · 2015
    Review
  9. SR protein kinases promote splicing of nonconsensus introns.Nature structural & molecular biology · 2015
    Article
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tao HuangDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461-1975, USA.
Josep Vilardell
Charles C Query
Albert Einstein College of Medicine · US

Funding

PROTEIN RNA REARRANGEMENTS IN THE SPLICEOSOMER01GM057829 · NIGMS · YESHIVA UNIVERSITY · PI QUERY, CHARLES C · 1999 to 2025
$11.4M
RIBOSOMAL PROTEIN GENES OF SACCHAROMYCES CEREVISIAER01GM025532 · NIGMS · YESHIVA UNIVERSITY · PI WARNER, JONATHAN R. · 1985 to 2010
$6.2M
NIGMS NIH HHS GM25532NIGMS NIH HHS GM57829NIGMS NIH HHS R01 GM025532NIGMS NIH HHS R01 GM057829
6 · The paper itself

Abstract

We have initiated a biochemical analysis of splicing complexes in extracts from the fission yeast Schizosaccharomyces pombe. Extracts of S.pombe contain high levels of the spliceosome-like U2/5/6 tri-snRNP, which dissociates into mono-snRNPs in the presence of ATP, and supports binding of U2 snRNP to the 3' end of introns, yielding a weak ATP-independent E complex and the stable ATP-dependent complex A. The requirements for S.pombe complex A formation (pre-mRNA sequence elements, protein splicing factors, SF1/BBP and both subunits of U2AF) are analogous to those of mammalian complex A. The S.pombe SF1/BBP, U2AF(59) and U2AF(23) are tightly associated in a novel complex that is required for complex A formation. This pre-formed SF1- U2AF(59)-U2AF(23) complex may represent a streamlined mechanism for recognition of the branch site, pyrimidine tract and 3' splice site at the 3' end of introns.

Indexed as

Nuclear ProteinsAdenosine TriphosphateBase SequenceMacromolecular SubstancesModels, BiologicalMolecular Sequence DataProtein SubunitsRibonucleoproteinsRibonucleoprotein, U2 Small NuclearRNA-Binding ProteinsRNA, FungalRNA PrecursorsRNA SplicingSchizosaccharomycesSchizosaccharomyces pombe ProteinsSpliceosomesAdenosine TriphosphateMacromolecular SubstancesNuclear ProteinsProtein SubunitsRibonucleoproteinsRibonucleoprotein, U2 Small NuclearRNA-Binding ProteinsRNA, FungalRNA PrecursorsSchizosaccharomyces pombe ProteinsSplicing Factor U2AF

Identifiers

PMID12374752
PMCPMC129087
OpenAlexW2007777876

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.