Evidence map›Paper›PMID 12374748›Full record

ArticleThe EMBO journal2002

Two isoforms of Serpent containing either one or two GATA zinc fingers have different roles in Drosophila haematopoiesis.

Lucas Waltzer, Laetitia Bataillé, Sandrine Peyrefitte, Marc Haenlin

Erratum issuedOpen access · bronzeAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 103 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Two Isoforms ofFrontiers in cell and developmental biology · 2021
    Article
  10. Article
  11. Involvement ofFrontiers in physiology · 2021
    Article
  12. Evolution of Developmental GATA Factors in Nematodes.Journal of developmental biology · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Molecular and cellular biology · 2019
    Article
  18. Genetics · 2019
    Review
  19. Frontiers in immunology · 2018
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Lucas WaltzerCentre de Biologie du Développement-CNRS, 31062 Toulouse, France. haenlin@cict.fr
Laetitia Bataillé
Sandrine Peyrefitte
Marc Haenlin
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

serpent (srp) encodes a GATA transcription factor essential for haematopoiesis in Drosophila. Previously, Srp was shown to contain a single GATA zinc finger of C-terminal type. Here we show that srp encodes different isoforms, generated by alternative splicing, that contain either only a C-finger (SrpC) or both a C- and an N-finger (SrpNC). The presence of the N-finger stabilizes the interaction of Srp with palindromic GATA sites and allows interaction with the Friend of GATA factor U-shaped (Ush). We have examined the respective functions of SrpC and SrpNC during embryonic haematopoiesis. Both isoforms individually rescue blood cell formation that is lacking in an srp null mutation. Interestingly, while SrpC and SrpNC activate some genes in a similar manner, they regulate others differently. Interaction between SrpNC and Ush is responsible for some but not all aspects of the distinct activities of SrpC and SrpNC. Our results suggest that the inclusion or exclusion of the N-finger in the naturally occurring isoforms of Srp can provide an effective means of extending the versatility of srp function during development.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsBase SequenceDNADNA-Binding ProteinsDrosophilaDrosophila ProteinsGATA Transcription FactorsGene DeletionGene Expression RegulationGenes, InsectHematopoiesisMolecular Sequence DataProtein IsoformsSequence Homology, Amino AcidDNADNA-Binding ProteinsDrosophila ProteinsGATA Transcription FactorsProtein Isoformssrp protein, DrosophilaTranscription Factors

Identifiers

PMID12374748
PMCPMC129077
OpenAlexW2090217253

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.