Evidence map›Paper›PMID 12370311›Full record

ArticleMolecular and cellular biology2002

Rac2, a hematopoiesis-specific Rho GTPase, specifically regulates mast cell protease gene expression in bone marrow-derived mast cells.

Yi Gu, Michael C Byrne, Nivanka C Paranavitana, Bruce Aronow, Jamie E Siefring, Maria D'Souza, Heidi F Horton, Lawrence A Quilliam, David A Williams

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
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  3. Review
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  5. Deletion of Rac in Mature Osteoclasts Causes Osteopetrosis, an Age-Dependent Change in Osteoclast Number, and a Reduced Number of Osteoblasts In Vivo.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2016
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  15. RabGEF1 regulates stem cell factor/c-Kit-mediated signaling events and biological responses in mast cells.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  16. Article
  17. Article
  18. Article
  19. Generation and characterization of Rac3 knockout mice.Molecular and cellular biology · 2005
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Yi GuDivision of Experimental Hematology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio 45229, USA.
Michael C Byrne
Nivanka C Paranavitana
Bruce Aronow
Jamie E Siefring
Maria D'Souza
Heidi F Horton
Lawrence A Quilliam
David A Williams
International Society for Experimental Hematology · USCincinnati Children's Hospital Medical Center · USIndiana University School of MedicineWomen's Health Research Institute · CA

Funding

STEEL GENE PRODUCT AND STEM CELL PROLIFERATIONR01DK048605 · NIDDK · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI WILLIAMS, DAVID A · 1994 to 2002
$367k
NIDDK NIH HHS R01 DK48605
6 · The paper itself

Abstract

Rho family GTPases activate intracellular kinase cascades to modulate transcription of multiple genes. Previous studies have examined the roles of the ubiquitously expressed Rho GTPase, Rac1, in regulation of gene expression in cell lines and implicated NF-kappaB, serum response factor, and kinase signaling pathways in this regulation. To understand the role of the closely related but hematopoiesis-specific Rho GTPase, Rac2, in regulation of gene transcription, we compared the gene expression profiles between wild-type and Rac2(-/-) bone marrow-derived mast cells. Our data demonstrate remarkable specificity in the regulation of gene expression by Rac2 versus Rac1. Microarray analysis demonstrated that expression of 38 known genes was significantly altered in Rac2(-/-) mast cells after cytokine stimulation compared with those in wild-type cells. Of these, the expression of the mouse mast cell protease 7 (MMCP-7) gene in wild-type cells was highly induced at the transcriptional level after stimulation with stem cell factor (SCF). In spite of compensatorily increased expression of Rac1 in Rac2-deficient cells, SCF-induced MMCP-7 transcription did not occur. Surprisingly, the loss of MMCP-7 induction was not due to decreased activation of NF-kappaB, a transcription factor postulated to lie downstream of Rac1 and known to play a critical role in hematopoietic cell differentiation and proliferation. However, the activities of c-Jun N-terminal kinases (JNKs) were markedly decreased in Rac2(-/-) mast cells. Our results suggest that cytokine-stimulated activation of MMCP-7 gene transcription is selectively regulated by a Rac2-dependent JNK signaling pathway in primary mast cells and imply a remarkable specificity in the regulation of transcriptional activity by these two highly related Rho GTPases.

Indexed as

Gene Expression Regulation, EnzymologicAmino Acid MotifsAnimalsBlotting, NorthernBlotting, WesternBone Marrow CellsCell NucleusDactinomycinEnzyme ActivationImmunoblottingJNK Mitogen-Activated Protein KinasesMast CellsMiceMice, Inbred C57BLMitogen-Activated Protein KinasesNF-kappa BDactinomycinJNK Mitogen-Activated Protein KinasesMitogen-Activated Protein KinasesNF-kappa BPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-kitrac1 GTP-Binding ProteinRAC2 GTP-Binding Proteinrac GTP-Binding Proteinsrho GTP-Binding ProteinsSerine EndopeptidasesStem Cell FactorTpsab1 protein, mouseTpsb2 protein, mouseTryptases

Identifiers

PMID12370311
PMCPMC135684
OpenAlexW2101129972

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.