Evidence map›Paper›PMID 12370281›Full record

ArticleThe Journal of clinical investigation2002

Clinical and molecular analysis of patients with defects in micro heavy chain gene.

Eduardo Lopez Granados, Andrea S Porpiglia, Mary Beth Hogan, Nuria Matamoros, Silvia Krasovec, Claudio Pignata, C I E Smith, Lennart Hammarstrom, Janne Bjorkander, Bernd H Belohradsky and 3 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Primary B-cell immunodeficiencies.Human immunology · 2019
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. The genetics of hypogammaglobulinemia.Current allergy and asthma reports · 2004
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 10 institutions in 5 countries.

Eduardo Lopez GranadosDepartment of Immunology, St. Jude Children's Research Hospital, Memphis, Tennessee 38101, USA.
Andrea S Porpiglia
Mary Beth Hogan
Nuria Matamoros
Silvia Krasovec
Claudio Pignata
C I E Smith
Lennart Hammarstrom
Janne Bjorkander
Bernd H Belohradsky
G Fontan Casariego
M C Garcia Rodriguez
Mary Ellen Conley
Hospital Universitario La Paz · ESSt. Jude Children's Research Hospital · USCenter for Clinical Research (United States) · USFederico II University Hospital · ITGarrahan Hospital · ARHospital Universitario Son Dureta · ESKarolinska Institutet · SESahlgrenska University Hospital · SEUniversity of Tennessee Health Science Center · USWest Virginia University · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
GENETIC ASPECTS OF IMMUNODEFICIENCIESR37AI025129 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CONLEY, MARY ELLEN · 1999 to 2007
$2.7M
NIH Genetic Aspects of ImmunodeficiencyR56AI025129 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CONLEY, MARY ELLEN · 2010 to 2010
$507k
GENETIC ASPECTS OF IMMUNODEFICIENCYR01AI025129 · NIAID · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI CONLEY, MARY ELLEN · 1987 to 1998
–
NCI NIH HHS P30 CA021765NCI NIH HHS P30 CA21765NIAID NIH HHS AI-25129NIAID NIH HHS R37 AI025129NIAID NIH HHS R56 AI025129
6 · The paper itself

Abstract

Autosomal recessive disorders of B cell development are rare and heterogeneous. To determine the proportion of affected patients who have defects in the micro heavy chain (IGHM) gene, we used single-stranded conformational polymorphism analysis to screen genomic DNA from 40 unrelated patients with early onset infections, profound hypogammaglobulinemia, and absent B cells. All of the patients were genotypically normal in BTK, the gene that underlies X-linked agammaglobulinemia. Eight different mutations in the micro heavy chain were identified in 19 members of 12 unrelated families. Four of the mutations were large deletions that removed more than 40 kb of DNA in the IGHM locus. In six of the 12 families, the affected patients had an identical single base pair substitution, a G-->A, at the -1 position of the alternative splice site. Immunoglobulin haplotype analysis showed that this mutation occurred on at least three different haplotypes, indicating that this is a hot spot for mutations. Compared with patients with mutations in Btk, patients with defects in the micro heavy chain had an earlier onset of disease and more complications. Our study indicates that at least 20-30% of patients with autosomal recessive defects in B cell development have mutations in the micro heavy chain.

Indexed as

AdolescentAdultAgammaglobulinemiaChildFemaleGenetic LinkageHumansImmunoglobulin mu-ChainsInfantMaleMiddle AgedMutationPolymorphism, GeneticPolymorphism, Single-Stranded ConformationalX ChromosomeImmunoglobulin mu-Chains

Identifiers

PMID12370281
PMCPMC151150
OpenAlexW2137312399

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.