Evidence map›Paper›PMID 12369618›Full record

ArticlePlant molecular biology2002

OsARF1, an auxin response factor from rice, is auxin-regulated and classifies as a primary auxin responsive gene.

Frank Waller, Masaki Furuya, Peter Nick

Abstract read
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In one paragraph

Article in Plant molecular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 91 citations in OpenAlex.

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  11. Frontiers in plant science · 2022
    Article
  12. Article
  13. Article
  14. Distinct modes of manipulation of rice auxin response factor OsARF17 by different plant RNA viruses for infection.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Expression and Distribution of the Auxin Response Factors inInternational journal of molecular sciences · 2019
    Article
  17. Article
  18. A Sweetpotato Auxin Response Factor Gene (Frontiers in plant science · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Frank WallerInstitut für Biologie II, Albert-Ludwigs-Universität, Freiburg. frankw@aist-nara.ac.jp
Masaki Furuya
Peter Nick
University of Freiburg · DEHitachi (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We screened for auxin-induced genes with an expression correlated to the auxin-induced growth response from rice coleoptiles by fluorescent differential display. A rice homologue of the auxin response factor (ARF) family of transcriptional regulators, OsARF1, was identified. An OsARF1:GFP fusion protein was localized to the nucleus. Steady-state levels of OsARF1 mRNA correlated positively with auxin-dependent differential growth: gravitropic stimulation enhanced the amount of OsARF1 transcript in the lower, faster-growing flank accompanied by a decrease in the upper flank of gravitropically stimulated rice coleoptiles. Exogenous auxin up-regulated the steady-state level of OsARF1 mRNA within 15-30 min. This up-regulation is independent of de novo protein synthesis. Thus, OsARF1 is the first ARF that classifies as an early auxin-responsive gene. The observed auxin-dependent regulation comprises a new level of regulation in auxin-induced gene expression and is discussed as a possible feedback mechanism in plant growth control.

Indexed as

Amino Acid SequenceCell NucleusCotyledonDNA-Binding ProteinsDNA, ComplementaryGene Expression Regulation, PlantGravitropismGreen Fluorescent ProteinsIndoleacetic AcidsLuminescent ProteinsMolecular Sequence DataNicotianaNuclear ProteinsOryzaPlant ProteinsRecombinant Fusion ProteinsDNA-Binding ProteinsDNA, ComplementaryGreen Fluorescent ProteinsIndoleacetic AcidsLuminescent ProteinsNuclear ProteinsPlant ProteinsRecombinant Fusion ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID12369618
OpenAlexW1540835904

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.