Evidence map›Paper›PMID 12368870›Full record

ArticleNature2002

Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry.

Edwin Lasonder, Yasushi Ishihama, Jens S Andersen, Adriaan M W Vermunt, Arnab Pain, Robert W Sauerwein, Wijnand M C Eling, Neil Hall, Andrew P Waters, Hendrik G Stunnenberg and 1 more

Abstract read
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In one paragraph

Article in Nature, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 224 papers.

0numbers the graph read from it
0cells of the map it votes in
224citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

224 citing papers in PubMed.

  1. Article
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  6. ThemSphere · 2024
    Article
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  9. Review
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  15. Article
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  17. Review
  18. Structure of the Plasmodium falciparum PfSERA5 pseudo-zymogen.Protein science : a publication of the Protein Society · 2020
    Article
  19. Article
  20. Article

164 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Edwin LasonderCenter for Experimental BioInformatics, Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark.
Yasushi Ishihama
Jens S Andersen
Adriaan M W Vermunt
Arnab Pain
Robert W Sauerwein
Wijnand M C Eling
Neil Hall
Andrew P Waters
Hendrik G Stunnenberg
Matthias Mann

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The annotated genomes of organisms define a 'blueprint' of their possible gene products. Post-genome analyses attempt to confirm and modify the annotation and impose a sense of the spatial, temporal and developmental usage of genetic information by the organism. Here we describe a large-scale, high-accuracy (average deviation less than 0.02 Da at 1,000 Da) mass spectrometric proteome analysis of selected stages of the human malaria parasite Plasmodium falciparum. The analysis revealed 1,289 proteins of which 714 proteins were identified in asexual blood stages, 931 in gametocytes and 645 in gametes. The last two groups provide insights into the biology of the sexual stages of the parasite, and include conserved, stage-specific, secreted and membrane-associated proteins. A subset of these proteins contain domains that indicate a role in cell-cell interactions, and therefore can be evaluated as potential components of a malaria vaccine formulation. We also report a set of peptides with significant matches in the parasite genome but not in the protein set predicted by computational methods.

Indexed as

ProteomeAnimalsErythrocytesFemaleGerm CellsHumansLife Cycle StagesMaleMass SpectrometryPlasmodium falciparumProtozoan ProteinsProteomeProtozoan Proteins

Identifiers

PMID12368870

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.