Evidence map›Paper›PMID 12368356›Full record

ArticleJournal of virology2002

Implication of the lymphocyte-specific nuclear body protein Sp140 in an innate response to human immunodeficiency virus type 1.

Navid Madani, Robert Millette, Emily J Platt, Mariana Marin, Susan L Kozak, Donald B Bloch, David Kabat

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
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  7. Germline risk of clonal haematopoiesis.Nature reviews. Genetics · 2021
    Review
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  9. Autoantibodies to speckled protein family in primary biliary cholangitis.Allergy, asthma, and clinical immunology : official journal of the Canadian Society of Allergy and Clinical Immunology · 2021
    Article
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  11. Review
  12. Article
  13. Article
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  15. Article
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  18. CD84 is markedly up-regulated in Kawasaki disease arteriopathy.Clinical and experimental immunology · 2014
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Navid MadaniDepartment of Biochemistry and Molecular Biology, Oregon Health and Science University, Portland, Oregon 97201-3098, USA.
Robert Millette
Emily J Platt
Mariana Marin
Susan L Kozak
Donald B Bloch
David Kabat
Oregon Health & Science University · USMassachusetts General Hospital · US

Funding

Roles of Vif Variants and APOBEC3s in HIV-1/AIDSR01AI049729 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI KABAT, DAVID · 2001 to 2008
$2.3M
Role of Vif in HIV-1 Replication/AIDSR21AI049729 · NIAID · OREGON HEALTH AND SCIENCE UNIVERSITY · PI KABAT, DAVID · 2001 to 2001
$53k
NIAID NIH HHS AI49729NIAID NIH HHS R01 AI049729NIAID NIH HHS R21 AI049729
6 · The paper itself

Abstract

The viral infectivity factor (Vif) of human immunodeficiency virus type 1 (HIV-1) neutralizes an unidentified antiviral pathway that occurs only in nonpermissive (NP) cells. Using a yeast two-hybrid screen of a human lymphocyte cDNA library, we identified several potential Vif partners. One, the nuclear body protein Sp140, was found specifically in all NP cells (n = 12 cell lines tested; P < or = 0.001), and HIV-1 infection induced its partial dispersal from nuclear bodies into cytosolic colocalization with Vif. Our results implicate Sp140 in a response to HIV-1 that may be related to or coordinated with the pathway that inactivates HIV-1 lacking vif.

Indexed as

Antigens, NuclearBinding SitesGene Products, vifHeLa CellsHIV-1HL-60 CellsHumansJurkat CellsLymphocytesMutagenesisTranscription FactorsTumor Cells, CulturedU937 Cellsvif Gene Products, Human Immunodeficiency VirusAntigens, NuclearGene Products, vifSP140 protein, humanTranscription Factorsvif Gene Products, Human Immunodeficiency Virus

Identifiers

PMID12368356
PMCPMC136615
OpenAlexW2120693890

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.