Evidence map›Paper›PMID 12368300›Full record

ArticleJournal of virology2002

Transient induction of cyclin T1 during human macrophage differentiation regulates human immunodeficiency virus type 1 Tat transactivation function.

Li-Ying Liou, Christine H Herrmann, Andrew P Rice

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. P-TEFb as A Promising Therapeutic Target.Molecules (Basel, Switzerland) · 2020
    Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Role of myeloid cells in HIV-1-host interplay.Journal of neurovirology · 2015
    Review
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Li-Ying LiouDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas 77030, USA.
Christine H Herrmann
Andrew P Rice
Baylor College of Medicine · US

Funding

Virology CoreP30AI036211 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BUTEL, JANET S · 1994 to 2015
$21.7M
Mechanisms of HIV-1 latency in CD4+ T lymphocytesR01AI035381 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 1995 to 2007
$2.5M
REGULATION OF MRNA FOR TAK SUBUNITS IN T LYMPHOCYTESR01AI045374 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 1999 to 2008
$1.9M
Function and localization of HIV cofactor TAK/P-TEFbR01AI042558 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI HERRMANN, CHRISTINE · 2002 to 2005
$1.1M
Mechanism of HIV-1 Tat FunctionR56AI035381 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 2009 to 2009
$384k
Regulation of Tak/P-TEFbR21AI045374 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 2003 to 2003
$263k
REGULATION OF THE TAT ASSOCIATED KINASE, TAKR29AI042558 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI HERRMANN, CHRISTINE · 1998 to 2002
$251k
NIAID NIH HHS AI35381NIAID NIH HHS AI36211NIAID NIH HHS AI42558NIAID NIH HHS AI45374NIAID NIH HHS P30 AI036211NIAID NIH HHS R01 AI035381NIAID NIH HHS R01 AI042558NIAID NIH HHS R01 AI045374NIAID NIH HHS R21 AI045374NIAID NIH HHS R29 AI042558NIAID NIH HHS R56 AI035381
6 · The paper itself

Abstract

The human immunodeficiency virus type 1 (HIV-1) Tat protein is essential for viral replication and stimulates transcription of the integrated provirus by recruiting the kinase complex TAK/P-TEFb, composed of cyclin T1 (CycT1) and Cdk9, to the viral TAR RNA element. TAK/P-TEFb phosphorylates the RNA polymerase II complex and stimulates transcriptional elongation. In this report, we investigated the regulation of TAK/P-TEFb in primary human macrophages, a major target cell of HIV infection. While Cdk9 levels remained constant, CycT1 protein expression in freshly isolated monocytes was very low, increased early during macrophage differentiation, and, unexpectedly, decreased to very low levels after about 1 week in culture. The kinase activity of TAK/P-TEFb paralleled the changes in CycT1 protein expression. RNA analysis indicated that the transient induction of CycT1 protein expression involves a posttranscriptional mechanism. In transient transfection assays, the ability of Tat to transactivate the HIV long terminal repeat (LTR) in the late differentiated macrophages was greatly diminished relative to its ability to transactivate the HIV LTR in early differentiated cells, strongly suggesting that CycT1 is limiting for Tat function in late differentiated macrophages. Interestingly, lipopolysaccharide, a component of the cell wall of gram-negative bacteria, reinduced CycT1 expression late in macrophage differentiation. These results raise the possibility that regulation of CycT1 expression may be involved in establishing latent infection in macrophages and that opportunistic infection may reactivate the virus by inducing CycT1 expression.

Indexed as

Gene Expression Regulation, ViralHIV Long Terminal RepeatTranscriptional ActivationCD11c AntigenCell CountCell DifferentiationCyclin-Dependent Kinase 9Cyclin-Dependent KinasesCyclinsCyclin TDendritic CellsGene Products, tatHIV-1HumansLipopolysaccharidesMacrophagesCCNT1 protein, humanCD11c AntigenCDK9 protein, humanCyclin-Dependent Kinase 9Cyclin-Dependent KinasesCyclinsCyclin TGene Products, tatLipopolysaccharidesPositive Transcriptional Elongation Factor BProtein Serine-Threonine Kinasestat Gene Products, Human Immunodeficiency Virus

Identifiers

PMID12368300
PMCPMC136632
OpenAlexW2101696954

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.