ArticleGenome research2002
Draft sequencing and comparative genomics of Xylella fastidiosa strains reveal novel biological insights.
Article in Genome research, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed.
- Susceptibility toAoB PLANTS · 2021Article
- Genome-Scale Investigation of the Metabolic Determinants Generating Bacterial Fastidious Growth.mSystems · 2020Article
- Emergence of a Plant Pathogen in Europe Associated with Multiple Intercontinental Introductions.Applied and environmental microbiology · 2020Article
- Ionomic Differences between Susceptible and Resistant Olive Cultivars Infected byPathogens (Basel, Switzerland) · 2019Article
- Review
- The Xylella fastidosa RTX operons: evidence for the evolution of protein mosaics through novel genetic exchanges.BMC genomics · 2018Article
- BigR is a sulfide sensor that regulates a sulfur transferase/dioxygenase required for aerobic respiration of plant bacteria under sulfide stress.Scientific reports · 2018Article
- Characterization of the Xylella fastidiosa PD1311 gene mutant and its suppression of Pierce's disease on grapevines.Molecular plant pathology · 2017Article
- Complete genome-wide screening and subtractive genomic approach revealed new virulence factors, potential drug targets against bio-war pathogen Brucella melitensis 16M.Drug design, development and therapy · 2015Article
- Genome Sequence of a Xylella fastidiosa Strain Causing Sycamore Leaf Scorch Disease in Virginia.Genome announcements · 2014Article
- Draft Genome Sequence of Xylella fastidiosa Pear Leaf Scorch Strain in Taiwan.Genome announcements · 2014Article
- Genome Sequence of a Xylella fastidiosa Strain Causing Mulberry Leaf Scorch Disease in Maryland.Genome announcements · 2014Article
- Characterization of novel virulent broad-host-range phages of Xylella fastidiosa and Xanthomonas.Journal of bacteriology · 2014Article
- Draft Genome Sequence of Xylella fastidiosa subsp. multiplex Strain Griffin-1 from Quercus rubra in Georgia.Genome announcements · 2013Article
- The Xylella fastidiosa biocontrol strain EB92-1 genome is very similar and syntenic to Pierce's disease strains.Journal of bacteriology · 2011Article
- Genomic analysis of Xanthomonas oryzae isolates from rice grown in the United States reveals substantial divergence from known X. oryzae pathovars.Applied and environmental microbiology · 2011Article
- Genomic and biological analysis of phage Xfas53 and related prophages of Xylella fastidiosa.Journal of bacteriology · 2010Article
- Comparative genome-scale metabolic reconstruction and flux balance analysis of multiple Staphylococcus aureus genomes identify novel antimicrobial drug targets.Journal of bacteriology · 2009Article
- Morphological evidence for phages in Xylella fastidiosa.Virology journal · 2008Article
- Hypervariations of a protease-encoding gene, PD0218 (pspB), in Xylella fastidiosa strains causing almond leaf scorch and Pierce's disease in California.Applied and environmental microbiology · 2008Article
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Authors and funding
22 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Draft sequencing is a rapid and efficient method for determining the near-complete sequence of microbial genomes. Here we report a comparative analysis of one complete and two draft genome sequences of the phytopathogenic bacterium, Xylella fastidiosa, which causes serious disease in plants, including citrus, almond, and oleander. We present highlights of an in silico analysis based on a comparison of reconstructions of core biological subsystems. Cellular pathway reconstructions have been used to identify a small number of genes, which are likely to reside within the draft genomes but are not captured in the draft assembly. These represented only a small fraction of all genes and were predominantly large and small ribosomal subunit protein components. By using this approach, some of the inherent limitations of draft sequence can be significantly reduced. Despite the incomplete nature of the draft genomes, it is possible to identify several phage-related genes, which appear to be absent from the draft genomes and not the result of insufficient sequence sampling. This region may therefore identify potential host-specific functions. Based on this first functional reconstruction of a phytopathogenic microbe, we spotlight an unusual respiration machinery as a potential target for biological control. We also predicted and developed a new defined growth medium for Xylella.
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