Evidence map›Paper›PMID 12356861›Full record

ArticleThe Journal of cell biology2002

Phosphorylation and an ATP-dependent process increase the dynamic exchange of H1 in chromatin.

Yali Dou, Josephine Bowen, Yifan Liu, Martin A Gorovsky

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
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  13. Modules for C-terminal epitope tagging of Tetrahymena genes.Journal of microbiological methods · 2010
    Article
  14. Article
  15. Review
  16. Visualizing chromatin dynamics in intact cells.Biochimica et biophysica acta · 2008
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yali DouDepartment of Biology, University of Rochester, Rochester, NY 14627, USA.
Josephine Bowen
Yifan Liu
Martin A Gorovsky
University of Rochester · US

Funding

REPEATED GENES: ORGANIZATION, EVOLUTION, AND FUNCTIONR01GM021793 · NIGMS · UNIVERSITY OF ROCHESTER · PI GOROVSKY, MARTIN A · 1985 to 2008
$3.1M
NIGMS NIH HHS GM21793NIGMS NIH HHS R01 GM021793
6 · The paper itself

Abstract

In Tetrahymena cells, phosphorylation of linker histone H1 regulates transcription of specific genes. Phosphorylation acts by creating a localized negative charge patch and phenocopies the loss of H1 from chromatin, suggesting that it affects transcription by regulating the dissociation of H1 from chromatin. To test this hypothesis, we used FRAP of GFP-tagged H1 to analyze the effects of mutations that either eliminate or mimic phosphorylation on the binding of H1 to chromatin both in vivo and in vitro. We demonstrate that phosphorylation can increase the rate of dissociation of H1 from chromatin, providing a mechanism by which it can affect H1 function in vivo. We also demonstrate a previously undescribed ATP-dependent process that has a global effect on the dynamic binding of linker histone to chromatin.

Indexed as

Adenosine TriphosphateAnimalsBinding SitesBlotting, NorthernBlotting, SouthernCell NucleusChromatinGene Expression RegulationGreen Fluorescent ProteinsHistonesLuminescent ProteinsMicroscopy, ConfocalMutationPhosphorylationPlasmidsPotassium CyanideAdenosine TriphosphateChromatinGreen Fluorescent ProteinsHistonesLuminescent ProteinsPotassium CyanideRotenone

Identifiers

PMID12356861
PMCPMC2173238
OpenAlexW2046615335

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.