Evidence map›Paper›PMID 12324430›Full record

ArticleBiophysical journal2002

Effect of hydrophobic surfactant proteins SP-B and SP-C on phospholipid monolayers. Protein structure studied using 2D IR and beta correlation analysis.

Saratchandra Shanmukh, Phillip Howell, John E Baatz, Richard A Dluhy

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. Surfactant protein B 1580 polymorphism is associated with susceptibility to chronic obstructive pulmonary disease in Chinese Han population.Journal of Huazhong University of Science and Technology. Medical sciences = Hua zhong ke ji da xue xue bao. Yi xue Ying De wen ban = Huazhong keji daxue xuebao. Yixue Yingdewen ban · 2004
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Saratchandra ShanmukhUniversity of Georgia, Department of Chemistry, Athens 30602-2556, USA.
Phillip Howell
John E Baatz
Richard A Dluhy
University of Georgia · USMedical University of South Carolina · US

Funding

SPECTROSCOPY OF BIOMEMBRANE MONOLAYERSR01GM040117 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI DLUHY, RICHARD A. · 1995 to 2002
$567k
IN-SITU INFRARED ANALYSIS OF BIOMEMBRANE MONOLAYERSR29GM040117 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI DLUHY, RICHARD A. · 1988 to 1992
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SPECTROSCOPY AND IMAGING OF BIOMEMBRANE MONOLAYERSR55GM040117 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI DLUHY, RICHARD A. · 1993 to 1993
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NIGMS NIH HHS GM40117
6 · The paper itself

Abstract

We have applied two-dimensional infrared (2D IR) and betanu correlation spectroscopy to in-situ IR spectroscopy of pulmonary surfactant proteins SP-B and SP-C in lipid-protein monolayers at the air-water interface. For both SP-B and SP-C, a statistical windowed autocorrelation method identified two separate surface pressure regions that contained maximum amide I intensity changes: 4-25 mN/m and 25-40 mN/m. For SP-C, 2D IR and betanu correlation analyses of these regions indicated that SP-C adopts a variety of secondary structure conformations, including alpha-helix, beta-sheet, and an intermolecular aggregation of extended beta-sheet structure. The main alpha-helix band split into two peaks at high surface pressures, indicative of two different helix conformations. At low surface pressures, all conformations of the SP-C molecule reacted identically to increasing surface pressure and reoriented in phase with each other. Above 25 mN/m, however, the increasing surface pressure selectively affected the coexisting protein conformations, leading to an independent reorientation of the protein conformations. The asynchronous 2D IR spectrum of SP-B showed the presence of two alpha-helix components, consistent with two separate populations of alpha-helix in SP-B-a hydrophobic fraction associated with the lipid chains and a hydrophilic fraction parallel to the membrane surface. The distribution of correlation intensity between the two alpha-helix cross peaks indicated that the more hydrophobic helix fraction predominates at low surface pressures whereas the more hydrophilic helix fraction predominates at high surface pressures. The different SP-B secondary structures reacted identically to increasing surface pressure, leading to a reorientation of all SP-B subunits in phase with one another.

Indexed as

AirAnimalsCattleElectrophoresis, Polyacrylamide GelLipidsModels, StatisticalPhosphatidylglycerolsPhospholipidsProtein ConformationProtein Structure, SecondaryPulmonary Surfactant-Associated Protein BPulmonary Surfactant-Associated Protein CSpectrophotometry, InfraredSpectroscopy, Fourier Transform InfraredStatistics as TopicWater1,2-dipalmitoylphosphatidylglycerolLipidsPhosphatidylglycerolsPhospholipidsPulmonary Surfactant-Associated Protein BPulmonary Surfactant-Associated Protein CWater

Identifiers

PMID12324430
PMCPMC1302301
OpenAlexW2104346372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.