Evidence map›Paper›PMID 12271125›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Heritable endogenous gene regulation in plants with designed polydactyl zinc finger transcription factors.

Xuen Guan, Justin Stege, Myoung Kim, Zina Dahmani, Nancy Fan, Peter Heifetz, Carlos F Barbas, Steven P Briggs

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 94 citations in OpenAlex.

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  15. Advanced genetic tools for plant biotechnology.Nature reviews. Genetics · 2013
    Review
  16. Article
  17. Review
  18. Article
  19. A designed zinc-finger transcriptional repressor of phospholamban improves function of the failing heart.Molecular therapy : the journal of the American Society of Gene Therapy · 2012
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Xuen GuanTorrey Mesa Research Institute, San Diego, CA 92121, USA. xueni.guan@syngenta.com
Justin Stege
Myoung Kim
Zina Dahmani
Nancy Fan
Peter Heifetz
Carlos F Barbas
Steven P Briggs
Scripps Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zinc finger transcription factors (TFs(ZF)) were designed and applied to transgene and endogenous gene regulation in stably transformed plants. The target of the TFs(ZF) is the Arabidopsis gene APETALA3 (AP3), which encodes a transcription factor that determines floral organ identity. A zinc finger protein (ZFP) was designed to specifically bind to a region upstream of AP3. AP3 transcription was induced by transformation of leaf protoplasts with a transformation vector that expressed a TF(ZF) consisting of the ZFP fused to the tetrameric repeat of herpes simplex VP16's minimal activation domain. Histochemical staining of beta-glucuronidase (GUS) activity in transgenic AP3GUS reporter plants expressing GUS under control of the AP3 promoter was increased dramatically in petals when the AP3-specific TF(ZF) activator was cointroduced. TF(ZF)-amplified GUS expression signals were also evident in sepal tissues of these double-transgenic plants. Floral phenotype changes indicative of endogenous AP3 factor coactivation were also observed. The same AP3-specific ZFP(AP3) was also fused to a human transcriptional repression domain, the mSIN3 interaction domain, and introduced into either AP3GUS-expressing plants or wild-type Arabidopsis plants. Dramatic repression of endogenous AP3 expression in floral tissue resulted when a constitutive promoter was used to drive the expression of this TF(ZF). These plants were also sterile. When a floral tissue-specific promoter from APETALA1 (AP1) gene was used, floral phenotype changes were also observed, but in contrast the plants were fertile. Our results demonstrate that artificial transcriptional factors based on synthetic zinc finger proteins are capable of stable and specific regulation of endogenous genes through multiple generations in multicellular organisms.

Indexed as

Gene Expression Regulation, PlantZinc FingersAllelesAmino Acid SequenceArabidopsis ProteinsGlucuronidaseHomeodomain ProteinsHumansMADS Domain ProteinsMolecular Sequence DataPhenotypePlant LeavesPlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticProtein Structure, TertiaryAPETALA 3 protein, ArabidopsisArabidopsis ProteinsGlucuronidaseHomeodomain ProteinsMADS Domain ProteinsPlant ProteinsRNA, Messenger

Identifiers

PMID12271125
PMCPMC130627
OpenAlexW1982542312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.