Evidence map›Paper›PMID 12242334›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

The Chapel Hill hemophilia A dog colony exhibits a factor VIII gene inversion.

Jay N Lozier, Amalia Dutra, Evgenia Pak, Nan Zhou, Zhili Zheng, Timothy C Nichols, Dwight A Bellinger, Marjorie Read, Richard A Morgan

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 102 citations in OpenAlex.

  1. Review
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  3. Article
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  5. Article
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  12. Gene therapy for hemophilia: what does the future hold?Therapeutic advances in hematology · 2018
    Review
  13. Review
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jay N LozierFood and Drug Administration, Center for Biologics Evaluation and Research, Rockville, MD 20852, USA. lozier@cber.fda.gov
Amalia Dutra
Evgenia Pak
Nan Zhou
Zhili Zheng
Timothy C Nichols
Dwight A Bellinger
Marjorie Read
Richard A Morgan
National Human Genome Research Institute · USCenter for Biologics Evaluation and Research · USNational Cancer Institute · US

Funding

Maintenance of Models of Human Hemophilia and VWDR24HL063098 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NICHOLS, TIMOTHY CHARLES · 1999 to 2019
$15.1M
NHLBI NIH HHS HL63098NHLBI NIH HHS R24 HL063098
6 · The paper itself

Abstract

In the Chapel Hill colony of factor VIII-deficient dogs, abnormal sequence (ch8, for canine hemophilia 8, GenBank no. ) follows exons 1-22 in the factor VIII transcript in place of exons 23-26. The canine hemophilia 8 locus (ch8) sequence was found in a 140-kb normal dog genomic DNA bacterial artificial chromosome (BAC) clone that was completely outside the factor VIII gene, but not in BAC clones containing the factor VIII gene. The BAC clone that contained ch8 also contained a homologue of F8A (factor 8 associated) sequence, which participates in a common inversion that causes severe hemophilia A in humans. Fluorescence in situ hybridization analysis indicated that exons 1-26 normally proceed sequentially from telomere to centromere at Xq28, and ch8 is telomeric to the factor VIII gene. The appearance of an "upstream" genomic sequence element (ch8) at the end of the aberrant factor VIII transcript suggested that an inversion of genomic DNA replaced factor VIII exons 22-26 with ch8. The F8A sequence appeared also in overlapping normal BAC clones containing factor VIII sequence. We hypothesized that homologous recombination between copies of canine F8A inside and outside the factor VIII gene had occurred, as in human hemophilia A. High-resolution fluorescent in situ hybridization on hemophilia A dog DNA revealed a pattern consistent with this inversion mechanism. We also identified a HindIII restriction fragment length polymorphism of F8A fragments that distinguished hemophilia A, carrier, and normal dogs' DNA. The Chapel Hill hemophilia A dog colony therefore replicates the factor VIII gene inversion commonly seen in humans with severe hemophilia A.

Indexed as

Chromosome InversionAmino Acid SequenceAnimalsBase SequenceBlotting, SouthernCloning, MolecularDNA, ComplementaryDogsExonsFactor VIIIGene LibraryHumansIn Situ Hybridization, FluorescenceMolecular Sequence DataNucleic Acid HybridizationPolymerase Chain ReactionDNA, ComplementaryFactor VIIIRNA, Messenger

Identifiers

PMID12242334
PMCPMC130574
OpenAlexW2078640978

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.