Evidence map›Paper›PMID 12242225›Full record

ArticleGenetics2002

Identification of vib-1, a locus involved in vegetative incompatibility mediated by het-c in Neurospora crassa.

Qijun Xiang, N Louise Glass

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Regulation of nutrient utilization in filamentous fungi.Applied microbiology and biotechnology · 2023
    Review
  3. Article
  4. The F-box protein geneProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Article
  6. Article
  7. The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. Article
  9. Review
  10. Genome sequencing and transcriptome analysis ofBiotechnology for biofuels · 2017
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Qijun XiangDepartment of Plant and Microbial Biology, University of California, Berkeley, California 94720-3102, USA.
N Louise Glass
University of California, Berkeley · US

Funding

ANALYSIS OF PROGRAMMED CELL DEATH IN FILAMENTOUS FUNGIR01GM060468 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI GLASS, N LOUISE · 2000 to 2014
$3.6M
NIGMS NIH HHS GM-60468-01NIGMS NIH HHS R01 GM060468
6 · The paper itself

Abstract

A non-self-recognition system called vegetative incompatibility is ubiquitous in filamentous fungi and is genetically regulated by het loci. Different fungal individuals are unable to form viable heterokaryons if they differ in allelic specificity at a het locus. To identify components of vegetative incompatibility mediated by allelic differences at the het-c locus of Neurospora crassa, we isolated mutants that suppressed phenotypic aspects of het-c vegetative incompatibility. Three deletion mutants were identified; the deletions overlapped each other in an ORF named vib-1 (vegetative incompatibility blocked). Mutations in vib-1 fully relieved growth inhibition and repression of conidiation conferred by het-c vegetative incompatibility and significantly reduced hyphal compartmentation and death rates. The vib-1 mutants displayed a profuse conidiation pattern, suggesting that VIB-1 is a regulator of conidiation. VIB-1 shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. Native gel analysis of wild-type strains and vib-1 mutants indicated that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity.

Indexed as

Genes, FungalAcid PhosphataseAmino Acid SequenceBase SequenceDNA, FungalElectrophoresis, Polyacrylamide GelFungal ProteinsGenes, SuppressorGenetic Complementation TestMolecular Sequence DataNeurospora crassaOpen Reading FramesSequence DeletionSequence Homology, Amino AcidAcid PhosphataseDNA, FungalFungal Proteins

Identifiers

PMID12242225
PMCPMC1462268
OpenAlexW1894976307

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.