Evidence map›Paper›PMID 12239297›Full record

ArticleJournal of virology2002

Study of antigen-processing steps reveals preferences explaining differential biological outcomes of two HLA-A2-restricted immunodominant epitopes from human immunodeficiency virus type 1.

W M Cohen, A Bianco, F Connan, L Camoin, M Dalod, G Lauvau, E Ferriès, B Culmann-Penciolelli, P M van Endert, J P Briand and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Portable flanking sequences modulate CTL epitope processing.The Journal of clinical investigation · 2007
    Article
  7. Article
  8. Recognition of a subregion of human proinsulin by class I-restricted T cells in type 1 diabetic patients.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

W M CohenInstitut National de la Santé et de la Recherche Médicale Unité 445, Institut Cochin de Génétique Moléculaire, Hôpital Cochin, 27 rue du faubourg Saint-Jacques, 75014 Paris, France. cohen@cochin.inserm.fr
A Bianco
F Connan
L Camoin
M Dalod
G Lauvau
E Ferriès
B Culmann-Penciolelli
P M van Endert
J P Briand
J Choppin
J G Guillet
Inserm · FRCentre National pour la Recherche Scientifique et Technique (CNRST) · MAInstitut National de Recherche en Santé Publique · ML

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cytotoxic T-lymphocyte (CTL) responses directed to different human immunodeficiency virus (HIV) epitopes vary in their protective efficacy. In particular, HIV-infected cells are much more sensitive to lysis by anti-Gag/p17(77-85)/HLA-A2 than to that by anti-polymerase/RT(476-484)/HLA-A2 CTL, because of a higher density of p17(77-85) complexes. This report describes multiple processing steps favoring the generation of p17(77-85) complexes: (i) the exact COOH-terminal cleavage of epitopes by cellular proteases occurred faster and more frequently for p17(77-85) than for RT(476-484), and (ii) the binding efficiency of the transporter associated with antigen processing was greater for p17(77-85) precursors than for the RT(476-484) epitope. Surprisingly, these peptides, which differed markedly in their antigenicity, displayed qualitatively and quantitatively similar immunogenicity, suggesting differences in the mechanisms governing these phenomena. Here, we discuss the mechanisms responsible for such differences.

Indexed as

Cysteine EndopeptidasesMultienzyme ComplexesViral ProteinsAmino Acid SequenceAntigen PresentationBiological TransportEndopeptidasesEpitopes, T-Lymphocytegag Gene Products, Human Immunodeficiency VirusGene Products, gagHIV-1HIV AntigensHIV InfectionsHIV Reverse TranscriptaseHLA-A2 AntigenHumansCysteine EndopeptidasesEndopeptidasesEpitopes, T-Lymphocytegag Gene Products, Human Immunodeficiency VirusGene Products, gagHIV AntigensHIV Reverse TranscriptaseHLA-A2 AntigenImmunodominant EpitopesLMP-2 proteinLMP7 proteinMultienzyme Complexesp17 protein, Human Immunodeficiency Virus Type 1Proteasome Endopeptidase ComplexProtein PrecursorsProteinsViral Proteins

Identifiers

PMID12239297
PMCPMC136577
OpenAlexW2170128399

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.