Evidence map›Paper›PMID 12239293›Full record

ArticleJournal of virology2002

Molecular genetic evidence that the hydrophobic anchors of glycoproteins E2 and E1 interact during assembly of alphaviruses.

Ellen G Strauss, Edith M Lenches, James H Strauss

Abstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ellen G StraussDivision of Biology 156-29, California Institute of Technology, Pasadena, CA 91125, USA. strausse@cco.caltech.edu
Edith M Lenches
James H Strauss

Funding

TOGAVIRUS REPLICATION STRATEGIES &EVOLUTIONR01AI020612 · NIAID · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STRAUSS, JAMES · 1989 to 2004
$1.2M
GENETIC ANALYSIS OF SINDBIS VIRUSR01AI010793 · NIAID · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STRAUSS, JAMES · 1996 to 2000
$404k
TOGAVIRUS REPLICATION STRATEGIES &EVOLUTIONR22AI020612 · NIAID · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STRAUSS, JAMES · 1985 to 1991
–
GENETIC ANALYSIS OF SINDBIS VIRUSR37AI010793 · NIAID · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI STRAUSS, JAMES · 1986 to 1995
–
NIAID NIH HHS AI 10793NIAID NIH HHS AI 20612NIAID NIH HHS R01 AI020612
6 · The paper itself

Abstract

Chimeric alphaviruses in which the 6K and glycoprotein E1 moieties of Sindbis virus are replaced with those of Ross River virus grow very poorly, but upon passage, adapted variants arise that grow >100 times better. We have sequenced the entire domain encoding the E2, 6K, and E1 proteins of a number of these adapted variants and found that most acquired two amino acid changes, which had cumulative effects. In three independent passage series, amino acid 380 of E2, which is in the transmembrane domain, was mutated from the original isoleucine to serine in two instances and to valine once. We have now changed this residue to seven others by site-directed mutagenesis and tested the effects of these mutations on the growth of both the chimera [SIN(RRE1)] and of parental Sindbis. These results indicate that the transmembrane domains of glycoproteins E2 and E1 of alphaviruses interact in a sequence-dependent manner and that this interaction is required for efficient budding and assembly of infectious virions.

Indexed as

Capsid ProteinsAdaptation, PhysiologicalAmino Acid SequenceAmino Acid SubstitutionAnimalsBase SequenceCapsidCell LineCricetinaeDNA, ViralGenetic VariationHydrophobic and Hydrophilic InteractionsIsoleucineMembrane GlycoproteinsMolecular Sequence DataMutagenesis, Site-Directed6K protein, Sindbis virusCapsid ProteinsDNA, ViralE1 protein, Ross River virusE2 protein, Ross River virusglycoprotein E1, Sindbis virusglycoprotein E2, Sindbis virusIsoleucineMembrane GlycoproteinsViral Envelope Proteins

Identifiers

PMID12239293
PMCPMC136572

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.