Evidence map›Paper›PMID 12237411›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2002

Quantitative imaging of cis-regulatory reporters in living embryos.

Ivan J Dmochowski, Jane E Dmochowski, Paola Oliveri, Eric H Davidson, Scott E Fraser

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. A Structural Basis forChemphyschem : a European journal of chemical physics and physical chemistry · 2019
    Article
  3. Article
  4. Imaging macromolecular interactions at an interface.Langmuir : the ACS journal of surfaces and colloids · 2010
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ivan J DmochowskiDivisions of Biology and Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125, USA. ivan@its.caltech.edu
Jane E Dmochowski
Paola Oliveri
Eric H Davidson
Scott E Fraser
California Institute of Technology · US

Funding

Transcriptional Casualty in Embryonic Morphogenesis: from the Specifications GRNP01HD037105 · NICHD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI DAVIDSON, ERIC H · 1999 to 2018
$27.1M
NICHD NIH HHS HD37105NICHD NIH HHS P01 HD037105
6 · The paper itself

Abstract

A confocal laser scanning microscopy method has been developed for the quantitation of green fluorescent protein (GFP) as a reporter of gene activity in living three-dimensional structures such as sea urchin and starfish embryos. This method is between 2 and 50 times more accurate than conventional confocal microscopy procedures depending on the localization of GFP within an embryo. By using coinjected Texas red dextran as an internal fluorescent standard, the observed GFP intensity is corrected for variations in laser excitation and fluorescence collection efficiency. To relate the recorded image intensity to the number of GFP molecules, the embryos were lysed gently, and a fluorometric analysis of their contents was performed. Confocal laser scanning microscopy data collection from a single sea urchin blastula required less than 2 min, thereby allowing gene expression in dozens of embryos to be monitored in parallel with high spatial and temporal resolution.

Indexed as

Genes, ReporterAnimalsEmbryo, NonmammalianGreen Fluorescent ProteinsLuminescent ProteinsMicroscopy, ConfocalMicroscopy, FluorescenceRecombinant Fusion ProteinsRNA, MessengerSea UrchinsStarfishTime FactorsGreen Fluorescent ProteinsLuminescent ProteinsRecombinant Fusion ProteinsRNA, MessengerNon-programmatic

Identifiers

PMID12237411
PMCPMC130556
OpenAlexW2071641979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.