Evidence map›Paper›PMID 12223751›Full record

ArticlePlant physiology1997

Tris Is a Competitive Inhibitor of K+ Activation of the Vacuolar H+-Pumping Pyrophosphatase.

R. Gordon-Weeks, V. D. Koren'kov, S. H. Steele, R. A. Leigh

Abstract read
In one paragraph

Article in Plant physiology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

R. Gordon-WeeksBiochemistry and Physiology Department, IACR-Rothamsted, Harpenden, Hertfordshire AL5 2JQ, United Kingdom.
V. D. Koren'kov
S. H. Steele
R. A. Leigh

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The effects of a range of commonly used pH buffers on the hydrolytic activity of the plant vacuolar H+-transporting inorganic pyrophosphatase (V-PPase) from mung bean (Vigna radiata L.) hypocotyls were tested. All of the buffers inhibited K+ stimulation of the V-PPase, and the degree of inhibition was dependent on the concentrations of both the buffer and K+. The effects were dependent on the organic cation used in the buffers, and those tested inhibited in the order: Tris > Bis-Tris-propane > Bicine = Tricine > imidazole. Detailed studies revealed that a model in which Tris affects both the Km and Vmax for K+ stimulation provided an accurate description of the observed kinetics. The ability of different cations to stimulate the V-PPase was measured with a noncompeting buffer (5 mM imidazole-HCl) and the order of effectiveness was K+ = Rb+ > NH4+ >> Cs+ > Na+ > Li+, with the Km for K+ stimulation being about 1 to 2 mM. Published experiments performed in the presence of Tris were re-evaluated and all could be fitted to mixed inhibition kinetics, with kinetic parameters similar to those measured for the mung bean V-PPase. It is concluded that the variations in the published Km for K+ stimulation of the V-PPase are probably due to the effects of pH buffer cations and that the real value for this parameter is in the low millimolar range. The implications of this for regulation of the V-PPase by K+ in vivo and for the role of the enzyme in K+ transport into the vacuole are discussed.

Identifiers

PMID12223751
PMCPMC158378

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.