Evidence map›Paper›PMID 12223549›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2002

Intron 1 is required for cell type-specific, but not injury-responsive, peripherin gene expression.

Thomas E Uveges, Yuqing Shan, Bridget E Kramer, David C Wight, Linda M Parysek

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Role of the Intermediate Filament Protein Peripherin in Health and Disease.International journal of molecular sciences · 2022
    Review
  5. Article
  6. The nuclear events guiding successful nerve regeneration.Frontiers in molecular neuroscience · 2011
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Thomas E UvegesDepartment of Cell Biology, Neurobiology and Anatomy, University of Cincinnati, Cincinnati, Ohio 45267-0521, USA.
Yuqing Shan
Bridget E Kramer
David C Wight
Linda M Parysek
University of Cincinnati · USBiotechnology Institute · US

Funding

PHS HHS 35313
6 · The paper itself

Abstract

The "primitive" neurons of the peripheral nervous system (PNS) have the remarkable ability to regenerate new fibers. This regenerative process requires a sequence of gene activation and repression that is poorly understood. One gene that is almost exclusively expressed in neurons of the PNS and is activated after nerve injury is the peripherin intermediate filament gene, but little is known about the genomic elements that control either its restricted expression or its response to nerve injury in adult mice. Previous studies suggested that both 5' flanking sequence and intragenic regions were required for cell type-specific and injury-specific expression. To determine which intragenic regions were critical, mice were generated that expressed peripherin transgenes lacking different introns. Analyses of these mice revealed that deletion of introns 2-8 had no effect on either the cell type-specific or injury-specific expression of the peripherin gene; however, the remaining intron, intron 1, differentially bound Sp1 transcription-related proteins/protein complexes in extracts from peripherin-expressing and nonexpressing tissues. Furthermore, a transgene that lacked intron 1 was not expressed in many neurons that contain endogenous peripherin but was activated after injury. Thus, accurate cell type-specific peripherin gene expression in the PNS depends on elements within intron 1, but other sequences, most likely in the 5'flanking region, are required for activating the peripherin gene in response to nerve injury.

Indexed as

Membrane Glycoproteins3' Flanking Region5' Flanking RegionAnimalsBinding, CompetitiveBinding SitesCells, CulturedDNA FootprintingElectrophoretic Mobility Shift AssayGene ExpressionGenes, ReporterHumansImmunohistochemistryIntermediate Filament ProteinsIntronsMiceIntermediate Filament ProteinsMembrane GlycoproteinsNerve Tissue ProteinsOligonucleotidesPeripherinsPRPH protein, human

Identifiers

PMID12223549
PMCPMC6758109
OpenAlexW2160212317

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.