Evidence map›Paper›PMID 12218016›Full record

ArticleJournal of bacteriology2002

Adaptation of sucrose metabolism in the Escherichia coli wild-type strain EC3132.

Knut Jahreis, Lars Bentler, Jürgen Bockmann, Stephan Hans, Astrid Meyer, Jörg Siepelmeyer, Joseph W Lengeler

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 78 citations in OpenAlex.

  1. Metabolic engineering ofSynthetic and systems biotechnology · 2026
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  4. D-serine metabolism enhancesCurrent research in microbial sciences · 2026
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  6. Frontiers in plant science · 2025
    Review
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  9. Construction of an artificial consortium ofFrontiers in microbiology · 2022
    Article
  10. Article
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  12. Genomic plasticity of pathogenicProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Characterization ofOpen life sciences · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Knut JahreisArbeitsgruppe Genetik, Fachbereich Biologie/Chemie, Universität Osnabrück, D-49069 Osnabrück, Germany. Jahreis@Biologie.Uni-Osnabrueck.de
Lars Bentler
Jürgen Bockmann
Stephan Hans
Astrid Meyer
Jörg Siepelmeyer
Joseph W Lengeler
Osnabrück University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although Escherichia coli strain EC3132 possesses a chromosomally encoded sucrose metabolic pathway, its growth on low sucrose concentrations (5 mM) is unusually slow, with a doubling time of 20 h. In this report we describe the subcloning and further characterization of the corresponding csc genes and adjacent genes. The csc regulon comprises three genes for a sucrose permease, a fructokinase, and a sucrose hydrolase (genes cscB, cscK, and cscA, respectively). The genes are arranged in two operons and are negatively controlled at the transcriptional level by the repressor CscR. Furthermore, csc gene expression was found to be cyclic AMP-CrpA dependent. A comparison of the genomic sequences of the E. coli strains EC3132, K-12, and O157:H7 in addition to Salmonella enterica serovar Typhimurium LT2 revealed that the csc genes are located in a hot spot region for chromosomal rearrangements in enteric bacteria. The comparison further indicated that the csc genes might have been transferred relatively recently to the E. coli wild-type EC3132 at around the time when the different strains of the enteric bacteria diverged. We found evidence that a mobile genetic element, which used the gene argW for site-specific integration into the chromosome, was probably involved in this horizontal gene transfer and that the csc genes are still in the process of optimal adaptation to the new host. Selection for such adaptational mutants growing faster on low sucrose concentrations gave three different classes of mutants. One class comprised cscR(Con) mutations that expressed all csc genes constitutively. The second class constituted a cscKo operator mutation, which became inducible for csc gene expression at low sucrose concentrations. The third class was found to be a mutation in the sucrose permease that caused an increase in transport activity.

Indexed as

Adaptation, PhysiologicalBase Sequencebeta-FructofuranosidaseCloning, MolecularEscherichia coliEscherichia coli ProteinsFructokinasesGlycoside HydrolasesMolecular Sequence DataMutationRepressor ProteinsSequence Analysis, DNASucrosebeta-FructofuranosidaseEscherichia coli ProteinsfructokinaseFructokinasesGlycoside HydrolasesRepressor ProteinsSucrose

Identifiers

PMID12218016
PMCPMC135337
OpenAlexW2161811175

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.