Evidence map›Paper›PMID 12215899›Full record

ArticleGenes and immunity2002

Genetic linkage of systemic lupus erythematosus with chromosome 11q14 (SLEH1) in African-American families stratified by a nucleolar antinuclear antibody pattern.

A H Sawalha, B Namjou, S K Nath, J Kilpatrick, A Germundson, J A Kelly, D Hutchings, J James, J Harley

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Genes and immunity, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Current status of lupus genetics.Arthritis research & therapy · 2007
    Review
  5. Article
  6. Article
  7. Current advances in the human lupus genetics.Current rheumatology reports · 2004
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

A H SawalhaDepartment of Medicine, University of Oklahoma Health Sciences Center, OK, USA.
B Namjou
S K Nath
J Kilpatrick
A Germundson
J A Kelly
D Hutchings
J James
J Harley
Oklahoma Medical Research Foundation · USUnited States Department of Veterans Affairs · USUniversity of Oklahoma Health Sciences Center · US

Funding

X-LINKED EXTENSION OF THE REVISED HASEMAN-ELSTON ALGORITHM FOR LINKAGE ANALYSISP41RR003655 · NCRR · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI ELSTON, ROBERT C. · 1987 to 2011
$11.5M
HLA GENE COMPLEMENTATION IN PRIMARY SJOGREN'S AND LUPUSR01AI024717 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI KOTTYAN, LEAH CLAIRE, WEIRAUCH, MATTHEW TYSON · 1987 to 2025
$7.8M
GENETIC ASSOCIATION WITH LUPUS IN AMERICAN BLACKSR01AR042460 · NIAMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI HARLEY, JOHN BARKER · 1993 to 2009
$5.1M
Genetic Linkage in LupusR37AI024717 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI HARLEY, JOHN BARKER · 2005 to 2014
$4.2M
Y RNA SEQUENCES AND RO RNP FUNCTIONR01AI031584 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI HARLEY, JOHN BARKER · 1991 to 2006
$2.7M
Robust Linkage Methods for Human Pedigree DataR01HG001577 · NHGRI · CASE WESTERN RESERVE UNIVERSITY · PI GODDARD, KATRINA A · 2001 to 2004
$758k
ROBUST LINKAGE METHODS FOR HUMAN PEDIGREE DATAR29HG001577 · NHGRI · CASE WESTERN RESERVE UNIVERSITY · PI OLSON, JANE M. · 1996 to 2000
$101k
COMMUNITY PROGRAMS FOR CLINICAL RESEARCH ON AIDSN01AI045231 · NIAID · NORTH JERSEY COMMUNITY RES INITIATIVE · PI PEREZ, GEORGE · 1994 to 1997
–
LUPUS MULTIPLEX REGISTRY AND REPOSITORY-264012253N01AR012253 · NIAMS · OKLAHOMA MEDICAL RESEARCH FDN · 2002 to 2005
–
NCRR NIH HHS RR03655NHGRI NIH HHS HG01577NIAID NIH HHS AI24717NIAID NIH HHS AI31584NIAID NIH HHS AI45231NIAMS NIH HHS AR12253NIAMS NIH HHS AR42460
6 · The paper itself

Abstract

Systemic lupus erythematosus (SLE) is an autoimmune disease with complex genetics. We evaluated pedigrees multiplex for SLE that had an affected with antinucleolar antibodies to increase the homogeneity for genetic linkage analysis. We found a significant linkage effect on chromosome 11q14 at marker D11S2002 in African-American Pedigrees. This effect produced a maximum LOD score of 5.62 using a dominant inheritance model with 95% penetrance in males and 99% penetrance in females. The results were supported by multipoint linkage analysis. Fine mapping of the region with two additional markers within 6 cM of D11S2002 further provided evidence of linkage in this region. Linkage at D11S2002, named SLEH1, was previously found in some of these same African-American pedigrees multiplex for SLE, but who were stratified by hemolytic anemia (Kelly et al, submitted). In conclusion, an important SLE susceptibility gene, SLEH1 at 11q14, is identified in African-Americans when stratifying pedigrees by antinucleolar autoantibodies.

Indexed as

Chromosomes, Human, Pair 11Black or African AmericanBlack PeopleCell NucleolusFemaleFluorescent Antibody TechniqueGenetic LinkageHumansLod ScoreLupus Erythematosus, SystemicMaleMicrosatellite RepeatsModels, GeneticPedigreeWhite People

Identifiers

PMID12215899
OpenAlexW2019300364

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.