Evidence map›Paper›PMID 12215541›Full record

ArticleMolecular and cellular biology2002

Control of the hypoxic response in Drosophila melanogaster by the basic helix-loop-helix PAS protein similar.

Sofía Lavista-Llanos, Lázaro Centanin, Maximiliano Irisarri, Daniela M Russo, Jonathan M Gleadle, Silvia N Bocca, Mariana Muzzopappa, Peter J Ratcliffe, Pablo Wappner

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 251 citations in OpenAlex.

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45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sofía Lavista-LlanosInstituto de Investigaciones Bioquímicas Fundación Campomar, Buenos Aires 1405, Argentina.
Lázaro Centanin
Maximiliano Irisarri
Daniela M Russo
Jonathan M Gleadle
Silvia N Bocca
Mariana Muzzopappa
Peter J Ratcliffe
Pablo Wappner
Fundación Instituto Leloir · ARCentre for Human Genetics · GBUniversity of Oxford · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

In mammalian systems, the heterodimeric basic helix-loop-helix (bHLH)-PAS transcription hypoxia-inducible factor (HIF) has emerged as the key regulator of responses to hypoxia. Here we define a homologous system in Drosophila melanogaster, and we characterize its activity in vivo during development. By using transcriptional reporters in developing transgenic flies, we show that hypoxia-inducible activity rises to a peak in late embryogenesis and is most pronounced in tracheal cells. We show that the bHLH-PAS proteins Similar (Sima) and Tango (Tgo) function as HIF-alpha and HIF-beta homologues, respectively, and demonstrate a conserved mode of regulation for Sima by oxygen. Sima protein, but not its mRNA, was upregulated in hypoxia. Time course experiments following pulsed ectopic expression demonstrated that Sima is stabilized in hypoxia and that degradation relies on a central domain encompassing amino acids 692 to 863. Continuous ectopic expression overrode Sima degradation, which remained cytoplasmic in normoxia, and translocated to the nucleus only in hypoxia, revealing a second oxygen-regulated activation step. Abrogation of the Drosophila Egl-9 prolyl hydroxylase homologue, CG1114, caused both stabilization and nuclear localization of Sima, indicating a central involvement in both processes. Tight conservation of the HIF/prolyl hydroxylase system in Drosophila provides a new focus for understanding oxygen homeostasis in intact multicellular organisms.

Indexed as

Transcription FactorsActive Transport, Cell NucleusAnimalsAnimals, Genetically ModifiedAryl Hydrocarbon Receptor Nuclear TranslocatorBlotting, WesternCarrier ProteinsCell NucleusCytoplasmDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianGenes, ReporterHelix-Loop-Helix MotifsHypoxiaAryl Hydrocarbon Receptor Nuclear TranslocatorCarrier ProteinsDNA-Binding ProteinsDrosophila ProteinsOxygenRNA, MessengerSima protein, Drosophilatgo protein, DrosophilaTranscription Factors

Identifiers

PMID12215541
PMCPMC134029
OpenAlexW2164298308

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.