Evidence map›Paper›PMID 12208974›Full record

ArticleJournal of virology2002

Decreased levels of recent thymic emigrants in peripheral blood of simian immunodeficiency virus-infected macaques correlate with alterations within the thymus.

Donald L Sodora, Jeffrey M Milush, Felecia Ware, Aneta Wozniakowski, Lisa Montgomery, Harold M McClure, Andrew A Lackner, Marta Marthas, Vanessa Hirsch, R Paul Johnson and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Infection-Associated Thymic Atrophy.Frontiers in immunology · 2021
    Review
  7. Article
  8. Molecular measurement of T cell receptor excision circles.Methods in molecular biology (Clifton, N.J.) · 2013
    Article
  9. T-Cell Signaling in HIV-1 Infection.The open virology journal · 2013
    Article
  10. Thymic function is maintained during Salmonella-induced atrophy and recovery.Journal of immunology (Baltimore, Md. : 1950) · 2012
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Donald L SodoraDepartment of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, Texas 75390-9113, USA. Donald.Sodora@UTSouthwestern.edu
Jeffrey M Milush
Felecia Ware
Aneta Wozniakowski
Lisa Montgomery
Harold M McClure
Andrew A Lackner
Marta Marthas
Vanessa Hirsch
R Paul Johnson
Daniel C Douek
Richard A Koup
The University of Texas Southwestern Medical Center · USNational Institutes of Health · USPrimate Conservation · USTulane University · US

Funding

ZETA CHAIN OF T CELL RECEPTOR INTERACTS W/ NEF OF SIV &HIV2P51RR000168 · NCRR · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WESTMORELAND, SUSAN V. · 1985 to 2011
$139.3M
ZONA PELLUCIDA PEPTIDES AS IMMUNOCONTRACEPTIVE ANTIGENSP51RR000169 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI HYDE, DALLAS MELVIN · 1985 to 2011
$126.2M
STUDIES OF SIMIAN IMMUNODEFICIENCY VIRUS (SIV) INFECTION OF MACAQUESZ01AI000370 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI HIRSCH, VANESSA M. · 1985 to 2008
$5.6M
VIROLOGY AND IMMUNOLOGY OF ACUTE HIV1 INFECTIONR01AI035522 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI PETERSON, DOLORES MURL · 1994 to 2006
$2.7M
Immune ReconstitutionZ01AI005013 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI KOUP, RICHARD A · 2002 to 2008
$1.9M
ORAL TRANSMISSION OF A FLUORESCENT SIVR01DE012926 · NIDCR · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI SODORA, DONALD L · 1999 to 2003
$1.1M
MOUSE MODELS OF CANCER, BONE DISEASE, AND LACTATIONK26RR000168 · NCRR · OHIO STATE UNIVERSITY · PI ROSOL, THOMAS J · 2000 to 2004
$547k
VIROLOGY AND IMMUNOLOGY OF ACUTE HIV1 INFECTIONR37AI035522 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI KOUP, RICHARD A. · 1998 to 2000
$373k
NCRR NIH HHS K26 RR000168NCRR NIH HHS P51 RR000168NCRR NIH HHS P51 RR000169NCRR NIH HHS RR00168NCRR NIH HHS RR00169NIAID NIH HHS AI35522NIAID NIH HHS R01 AI035522NIAID NIH HHS R37 AI035522NIDCR NIH HHS DE12926NIDCR NIH HHS R01 DE012926
6 · The paper itself

Abstract

The thymus is responsible for de novo production of CD4(+) and CD8(+) T cells and therefore is essential for T-cell renewal. The goal of this study was to assess the impact of simian immunodeficiency virus (SIV) infection on the production of T cells by the thymus. Levels of recent thymic emigrants within the peripheral blood were assessed through quantification of macaque T-cell receptor excision circles (TREC). Comparison of SIV-infected macaques (n = 15) to uninfected macaques (n = 23) revealed stable or increased TREC levels at 20 to 34 weeks postinfection. Further assessment of SIV-infected macaques (n = 4) determined that TREC levels decreased between 24 and 48 weeks postinfection. Through the assessment of longitudinal time points in three additional SIVmac239-infected macaques, the SIV infection was divided into two distinct phases. During phase 1 (16 to 30 weeks), TREC levels remained stable or increased within both the CD4 and CD8 T-cell populations. During phase 2 (after 16 to 30 weeks), TREC levels declined in both T-cell populations. As has been described for human immunodeficiency virus (HIV)-infected patients, this decline in TREC levels did at times correlate with an increased level of T-cell proliferation (Ki67(+) cells). However, not all TREC decreases could be attributed to increased T-cell proliferation. Further evidence for thymic dysfunction was observed directly in a SIVmac239-infected macaque that succumbed to simian AIDS at 65 weeks postinfection. The thymus of this macaque contained an increased number of memory/effector CD8(+) T cells and an increased level of apoptotic cells. In summary, reduced levels of TREC can be observed beginning at 16 to 30 weeks post-SIV infection and correlate with changes indicative of dysfunction within the thymic tissue. SIV infection of macaques will be a useful model system to elucidate the mechanisms responsible for the thymic dysfunction observed in HIV-infected patients.

Indexed as

AnimalsApoptosisCD4 Lymphocyte CountCell MovementGene Rearrangement, T-LymphocyteIn Situ Nick-End LabelingMacaca mulattaSimian Acquired Immunodeficiency SyndromeThymus Gland

Identifiers

PMID12208974
PMCPMC136511
OpenAlexW2018306895

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.