Evidence map›Paper›PMID 12208878›Full record

ArticleThe Journal of experimental medicine2002

Chronic lymphocytic leukemia B cells can undergo somatic hypermutation and intraclonal immunoglobulin V(H)DJ(H) gene diversification.

Carmela Gurrieri, Peter McGuire, Hong Zan, Xiao-Jie Yan, Andrea Cerutti, Emilia Albesiano, Steven L Allen, Vincent Vinciguerra, Kanti R Rai, Manlio Ferrarini and 2 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of experimental medicine, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 94 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. Chronic Lymphocytic Leukemia.Cold Spring Harbor perspectives in medicine · 2021
    Review
  7. Article
  8. Review
  9. Review
  10. Review
  11. Human memory B cells.Leukemia · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Carmela GurrieriDivision of Molecular Immunology, Department of Pathology, Cornell University Weill Medical College, New York, NY 10021, USA.
Peter McGuire
Hong Zan
Xiao-Jie Yan
Andrea Cerutti
Emilia Albesiano
Steven L Allen
Vincent Vinciguerra
Kanti R Rai
Manlio Ferrarini
Paolo Casali
Nicholas Chiorazzi
North Shore University Hospital · USCornell University · USLong Island Jewish Medical Center · US

Funding

Immunoglobulin class switch DNA recombinationR01AI045011 · NIAID · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 2000 to 2011
$3.8M
IMMUNOLOGY RESEARCH TRAINING PROGRAMT32AI007621 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI CESARMAN, ETHEL · 1999 to 2014
$3.4M
B CELL REPERTOIRES IN CHRONIC LYMPHOCYTIC LEUKEMIAR01CA081554 · NCI · NORTH SHORE UNIVERSITY HOSPITAL · PI CHIORAZZI, NICHOLAS · 2000 to 2012
$2.7M
SOMATIC HYPERMUTATION IN HUMAN B CELLSR01AR040908 · NIAMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 1992 to 2005
$1.8M
B CLL SUBGROUPS--MATURATION STAGE AND GENE EXPRESSIONR01CA087956 · NCI · NORTH SHORE UNIVERSITY HOSPITAL · PI CHIORAZZI, NICHOLAS · 2001 to 2004
$1.2M
AGING--ANTIBODY RESPONSE TO BACTERIAL AND VIRAL AGSR01AG013910 · NIA · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 1997 to 2001
$687k
Immunoglobulin class switch DNA recombinationR56AI045011 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI CASALI, PAOLO · 2012 to 2012
$523k
ROLE OF CD30: CD153-PATHOGENESIS OF RHEUMATOID ARTHRITISR01AR047872 · NIAMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CERUTTI, ANDREA · 2001 to 2003
$507k
SEROLOGIC, CELLULAR/MOLECULAR STUDIES OF AUTOANTIBODIESR01AI010811 · NIAID · ROCKEFELLER UNIVERSITY · PI CHIORAZZI, NICHOLAS · 1985 to 2000
$311k
NCI NIH HHS CA81554NCI NIH HHS CA87956NCI NIH HHS R01 CA081554NCI NIH HHS R01 CA087956NIAID NIH HHS AI07621NIAID NIH HHS AI10811NIAID NIH HHS AI45011NIAID NIH HHS R01 AI045011NIAID NIH HHS R56 AI045011NIAID NIH HHS T32 AI007621NIAMS NIH HHS AR40908NIAMS NIH HHS R01 AR040908NIAMS NIH HHS R01 AR047872NIA NIH HHS AG13910
6 · The paper itself

Abstract

Chronic lymphocytic leukemia (CLL) arises from the clonal expansion of a CD5(+) B lymphocyte that is thought not to undergo intraclonal diversification. Using V(H)DJ(H) cDNA single strand conformation polymorphism analyses, we detected intraclonal mobility variants in 11 of 18 CLL cases. cDNA sequence analyses indicated that these variants represented unique point-mutations (1-35/patient). In nine cases, these mutations were unique to individual submembers of the CLL clone, although in two cases they occurred in a large percentage of the clonal submembers and genealogical trees could be identified. The diversification process responsible for these changes led to single nucleotide changes that favored transitions over transversions, but did not target A nucleotides and did not have the replacement/silent nucleotide change characteristics of antigen-selected B cells. Intraclonal diversification did not correlate with the original mutational load of an individual CLL case in that diversification was as frequent in CLL cells with little or no somatic mutations as in those with considerable mutations. Finally, CLL B cells that did not exhibit intraclonal diversification in vivo could be induced to mutate their V(H)DJ(H) genes in vitro after stimulation. These data indicate that a somatic mutation mechanism remains functional in CLL cells and could play a role in the evolution of the clone.

Indexed as

Antibody DiversityDNA, ComplementaryDNA, NeoplasmEvolution, MolecularFemaleGene Rearrangement, B-Lymphocyte, Heavy ChainHumansIn Vitro TechniquesLeukemia, Lymphocytic, Chronic, B-CellMaleMolecular Sequence DataPoint MutationPolymorphism, Single-Stranded ConformationalDNA, ComplementaryDNA, Neoplasm

Identifiers

PMID12208878
PMCPMC2194006
OpenAlexW2067005655

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.