Evidence map›Paper›PMID 12206510›Full record

ArticleJournal of protein chemistry2002

Inhibition of ras-induced oocyte maturation by peptides from ras-p21 and GTPase activating protein (GAP) identified as being effector domains from molecular dynamics calculations.

Fred K Friedman, Lyndon Chie, Denise Chung, Richard Robinson, Paul Brandt-Rauf, Ziro Yamaizumi, Matthew R Pincus

Abstract read
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In one paragraph

Article in Journal of protein chemistry, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Fred K FriedmanLaboratory of Metabolism, National Cancer Institute, Bethesda, MD 20892, USA.
Lyndon Chie
Denise Chung
Richard Robinson
Paul Brandt-Rauf
Ziro Yamaizumi
Matthew R Pincus
National Cancer Institute · USColumbia University · USLong Island University · USSUNY Downstate Health Sciences University · USVA NY Harbor Healthcare System · US

Funding

PROTEIN STRUCTURE AND ONCOGENESISR01CA042500 · NCI · UPSTATE MEDICAL UNIVERSITY · PI PINCUS, MATTHEW R · 1987 to 2004
$1.1M
NCI NIH HHS CA 42500
6 · The paper itself

Abstract

In the accompanying article, using molecular dynamics calculations, we found that the 66-77 and 122-138 domains in ras-p21 and the 821-827, 832-845, 917-924, 943-953, and 1003-1020 domains in GAP have different conformations in complexes of GAP with wild-type and oncogenic ras-p21. We have now synthesized peptides corresponding to each of these domains and coinjected them into oocytes with oncogenic p21, which induces oocyte maturation, or injected them into oocytes incubated with insulin that induces maturation by activating wild-type cellular ras-p21. We find that all of these peptides inhibit both agents but do not inhibit progesterone-induced maturation that occurs by a ras-independent pathway. The p21 66-77 and 122-138 peptides cause greater inhibition of oncogenic p21. On the other hand, the GAP 832-845 and 1003-1021 peptides inhibit insulin-induced maturation to a significantly greater extent. Since we have found that activated wild-type and oncogenic p21 activate downstream targets like raf differently, these GAP peptides may be useful probes for identifying elements unique to the wild-type ras-p21 pathway.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAnimalsBinding SitesDose-Response Relationship, DrugEnzyme InhibitorsEscherichia coliGTPase-Activating ProteinsInsulinMolecular Sequence DataOncogene Protein p21(ras)OocytesPeptide FragmentsProgesteroneProtein Structure, TertiaryProto-Oncogene Proteins p21(ras)Enzyme InhibitorsGTPase-Activating ProteinsInsulinOncogene Protein p21(ras)Peptide FragmentsProgesteroneProto-Oncogene Proteins p21(ras)

Identifiers

PMID12206510
OpenAlexW195109764

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.